Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ACF3N8_RS05400 | Genome accession | NZ_CP171119 |
| Coordinates | 1137867..1138256 (+) | Length | 129 a.a. |
| NCBI ID | WP_009383916.1 | Uniprot ID | K9AX51 |
| Organism | Staphylococcus massiliensis strain WGS1515 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1132867..1143256
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACF3N8_RS05365 (ACF3N8_05365) | atpD | 1132917..1134332 (+) | 1416 | WP_009383923.1 | F0F1 ATP synthase subunit beta | - |
| ACF3N8_RS05370 (ACF3N8_05370) | - | 1134353..1134757 (+) | 405 | WP_009383922.1 | F0F1 ATP synthase subunit epsilon | - |
| ACF3N8_RS05375 (ACF3N8_05375) | - | 1134948..1135178 (+) | 231 | WP_009383921.1 | DUF1146 family protein | - |
| ACF3N8_RS05380 (ACF3N8_05380) | murA | 1135287..1136552 (+) | 1266 | WP_009383920.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| ACF3N8_RS05385 (ACF3N8_05385) | - | 1136571..1136750 (+) | 180 | WP_009383919.1 | DNA-directed RNA polymerase subunit beta | - |
| ACF3N8_RS05390 (ACF3N8_05390) | fabZ | 1136768..1137205 (+) | 438 | WP_009383918.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| ACF3N8_RS05395 (ACF3N8_05395) | - | 1137243..1137677 (-) | 435 | WP_009383917.1 | YwpF-like family protein | - |
| ACF3N8_RS05400 (ACF3N8_05400) | ssb | 1137867..1138256 (+) | 390 | WP_009383916.1 | single-stranded DNA-binding protein | Machinery gene |
| ACF3N8_RS05405 (ACF3N8_05405) | - | 1138509..1139342 (+) | 834 | WP_017176879.1 | transglycosylase family protein | - |
| ACF3N8_RS05410 (ACF3N8_05410) | - | 1139672..1140394 (+) | 723 | WP_238094263.1 | SceA protein | - |
| ACF3N8_RS05415 (ACF3N8_05415) | tenA | 1140733..1141410 (+) | 678 | WP_238101094.1 | thiaminase II | - |
| ACF3N8_RS05420 (ACF3N8_05420) | thiD | 1141414..1142226 (+) | 813 | WP_009383912.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| ACF3N8_RS05425 (ACF3N8_05425) | thiM | 1142219..1143007 (+) | 789 | WP_392450382.1 | hydroxyethylthiazole kinase | - |
Sequence
Protein
Download Length: 129 a.a. Molecular weight: 14956.13 Da Isoelectric Point: 8.9364
>NTDB_id=1060225 ACF3N8_RS05400 WP_009383916.1 1137867..1138256(+) (ssb) [Staphylococcus massiliensis strain WGS1515]
MINKIVIVGRITKDPQLFEKEDKRVVSFCVATERNYKNEDDEMIYDFHLCKAFGKTATNIKKYTKQGSIVGVTGQMQTRQ
YEKDDKKHYSTELVVDTIKFMSPLNPKKDQKPKKETDDLEQILSTVSTN
MINKIVIVGRITKDPQLFEKEDKRVVSFCVATERNYKNEDDEMIYDFHLCKAFGKTATNIKKYTKQGSIVGVTGQMQTRQ
YEKDDKKHYSTELVVDTIKFMSPLNPKKDQKPKKETDDLEQILSTVSTN
Nucleotide
Download Length: 390 bp
>NTDB_id=1060225 ACF3N8_RS05400 WP_009383916.1 1137867..1138256(+) (ssb) [Staphylococcus massiliensis strain WGS1515]
ATGATTAATAAAATTGTAATCGTAGGCCGTATAACTAAGGATCCACAGCTTTTTGAAAAGGAGGATAAACGCGTAGTTTC
GTTTTGTGTAGCAACTGAACGAAATTATAAAAATGAAGATGATGAAATGATTTATGATTTTCATTTATGTAAAGCTTTCG
GTAAGACAGCAACAAATATTAAAAAGTATACGAAACAAGGTTCTATCGTAGGCGTTACTGGGCAAATGCAAACTAGACAA
TATGAGAAGGATGATAAAAAACATTATAGTACTGAACTGGTAGTTGATACGATTAAATTTATGTCACCATTAAATCCCAA
AAAAGATCAGAAACCGAAAAAAGAAACAGATGATCTGGAACAAATTCTTTCAACGGTTTCAACAAATTAA
ATGATTAATAAAATTGTAATCGTAGGCCGTATAACTAAGGATCCACAGCTTTTTGAAAAGGAGGATAAACGCGTAGTTTC
GTTTTGTGTAGCAACTGAACGAAATTATAAAAATGAAGATGATGAAATGATTTATGATTTTCATTTATGTAAAGCTTTCG
GTAAGACAGCAACAAATATTAAAAAGTATACGAAACAAGGTTCTATCGTAGGCGTTACTGGGCAAATGCAAACTAGACAA
TATGAGAAGGATGATAAAAAACATTATAGTACTGAACTGGTAGTTGATACGATTAAATTTATGTCACCATTAAATCCCAA
AAAAGATCAGAAACCGAAAAAAGAAACAGATGATCTGGAACAAATTCTTTCAACGGTTTCAACAAATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
64.078 |
79.845 |
0.512 |
| ssb | Staphylococcus aureus MW2 |
63.107 |
79.845 |
0.504 |