Detailed information    

insolico Bioinformatically predicted

Overview


Name   braR   Type   Regulator
Locus tag   ACF3N8_RS02760 Genome accession   NZ_CP171119
Coordinates   581531..582196 (+) Length   221 a.a.
NCBI ID   WP_009382397.1    Uniprot ID   K9AS40
Organism   Staphylococcus massiliensis strain WGS1515     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 576531..587196
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACF3N8_RS02745 (ACF3N8_02745) - 576658..578082 (+) 1425 WP_392450198.1 phosphate--AMP phosphotransferase -
  ACF3N8_RS02750 (ACF3N8_02750) - 578235..579569 (-) 1335 WP_103370597.1 IS1182 family transposase -
  ACF3N8_RS02755 (ACF3N8_02755) - 580135..581355 (-) 1221 WP_009382399.1 ammonium transporter -
  ACF3N8_RS02760 (ACF3N8_02760) braR 581531..582196 (+) 666 WP_009382397.1 response regulator transcription factor Regulator
  ACF3N8_RS02765 (ACF3N8_02765) - 582209..583111 (+) 903 WP_009382395.1 sensor histidine kinase -
  ACF3N8_RS02770 (ACF3N8_02770) - 583206..583955 (+) 750 WP_009382394.1 ABC transporter ATP-binding protein -
  ACF3N8_RS02775 (ACF3N8_02775) - 583957..585948 (+) 1992 WP_009382392.1 ABC transporter permease -
  ACF3N8_RS02780 (ACF3N8_02780) - 586218..586769 (-) 552 WP_009382390.1 helix-turn-helix domain-containing protein -

Sequence


Protein


Download         Length: 221 a.a.        Molecular weight: 25735.67 Da        Isoelectric Point: 5.6294

>NTDB_id=1060220 ACF3N8_RS02760 WP_009382397.1 581531..582196(+) (braR) [Staphylococcus massiliensis strain WGS1515]
MKILIVEDDRVIAQALKQALNKWQLEAEIVTNFNHIVDDYVKPDIHLILLDINLPSFNGYYWCQEIRKVSNVPIIFISSR
SDSMDKVMAIEMGGDDYIEKPFDMTVTISKIQALLRRTYDFNATSHHLDVQGCKLVVEEGKLYYDDQVIDLTFTELQIVH
QLFKNEGQYVSRNKLIETCWESEHFIDDNTLAVNMTRLRKKLKSIGVQDLIQTKKNMGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=1060220 ACF3N8_RS02760 WP_009382397.1 581531..582196(+) (braR) [Staphylococcus massiliensis strain WGS1515]
ATGAAGATTTTAATCGTTGAGGACGATCGCGTGATTGCACAAGCACTAAAGCAAGCCTTGAATAAATGGCAACTTGAAGC
GGAAATCGTTACAAATTTTAACCATATTGTAGATGACTACGTGAAACCGGACATTCACCTTATCCTACTTGATATTAACT
TACCTTCCTTTAACGGATATTACTGGTGCCAGGAAATTCGCAAAGTCTCTAATGTGCCGATTATCTTCATTAGTTCACGT
TCTGATAGCATGGACAAAGTTATGGCAATTGAGATGGGTGGCGATGACTACATTGAAAAGCCCTTCGACATGACAGTTAC
CATTAGTAAAATACAAGCCTTACTTAGACGTACGTACGACTTCAATGCAACGTCGCATCACCTTGACGTACAAGGTTGTA
AACTTGTCGTTGAAGAAGGCAAGCTTTACTACGACGATCAAGTGATTGACCTTACATTTACCGAACTTCAGATTGTGCAC
CAACTTTTCAAAAATGAGGGGCAGTACGTGAGTCGTAATAAATTGATTGAAACGTGTTGGGAGTCAGAACATTTCATTGA
TGACAATACGCTCGCTGTAAATATGACGCGGCTTCGTAAAAAGTTAAAGTCGATTGGCGTTCAGGATTTGATTCAAACGA
AGAAAAACATGGGCTATAAAGTTTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB K9AS40

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

62.896

100

0.629


Multiple sequence alignment