Detailed information NTG1059273

Bioinformatically predicted

Overview

• Name: oppD
• Type: Regulator
• Locus tag: ACFKHK_RS07605
• Genome accession: NZ_CP170760
• Coordinates: 1448228..1449271 (-)
• Length: 347 a.a.
• NCBI ID: WP_171989134.1
• Uniprot ID: -
• Organism: Streptococcus parasuis strain FZ2
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1443228..1454271

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACFKHK_RS07575	yghU	1444371..1445159 (-)	789	WP_392461614.1	glutathione-dependent disulfide-bond oxidoreductase	-
ACFKHK_RS07580	-	1445168..1445458 (-)	291	WP_392461616.1	hypothetical protein	-
ACFKHK_RS07585	rplA	1445565..1446254 (-)	690	WP_239604109.1	50S ribosomal protein L1	-
ACFKHK_RS07590	rplK	1446295..1446720 (-)	426	WP_024382554.1	50S ribosomal protein L11	-
ACFKHK_RS07595	-	1446875..1447243 (+)	369	WP_312220290.1	DUF3397 domain-containing protein	-
ACFKHK_RS07600	amiF	1447296..1448231 (-)	936	WP_312248463.1	ATP-binding cassette domain-containing protein	Regulator
ACFKHK_RS07605	oppD	1448228..1449271 (-)	1044	WP_171989134.1	ABC transporter ATP-binding protein	Regulator
ACFKHK_RS07610	-	1449286..1450317 (-)	1032	WP_174845522.1	ABC transporter permease	-
ACFKHK_RS07615	-	1450328..1451242 (-)	915	WP_171989135.1	ABC transporter permease	-
ACFKHK_RS07620	-	1451313..1452959 (-)	1647	WP_392461620.1	peptide ABC transporter substrate-binding protein	-
ACFKHK_RS07625	-	1453388..1453774 (-)	387	WP_392461622.1	VOC family protein	-

Sequence

Protein

• Length: 347 a.a.
• Molecular weight: 38377.95 Da
• Isoelectric Point: 5.0184

>NTDB_id=1059273 ACFKHK_RS07605 WP_171989134.1 1448228..1449271(-) (oppD) [Streptococcus parasuis strain FZ2]
MNKETILQVENLNVTFHTYAGEVKAIRDVSFTLNKGETLAIVGESGSGKSVTTRTLMGLNAKNAHLSGKIHFKDKDLSEL
SESEWVKVRGNEIAMIFQDPMTSLDPTMTIGMQIAEPIMLHEKVSKSEALKRALELMKKVGIPNAEEHIKDYPHQWSGGM
RQRAVIAIALAANPEILIADEPTTALDVTIQAQILNLMKEIQSQTQSSIIFITHDLGVVAGMADRVAVMYAGKIVEVGTV
EEVFYNPQHPYTWGLLNSMPTTETASGSLESIPGTPPDLLNPPVGDAFAARNAYALDIDFEEQPPMFQISDSHYAATWLL
DERAPEITPPLAILKRWEKWNSKKEKQ

Nucleotide

• Length: 1044 bp

>NTDB_id=1059273 ACFKHK_RS07605 WP_171989134.1 1448228..1449271(-) (oppD) [Streptococcus parasuis strain FZ2]
ATGAATAAAGAAACGATTTTACAAGTTGAAAATTTAAATGTTACCTTTCATACCTATGCAGGTGAAGTCAAGGCGATTCG
TGATGTCAGTTTTACTTTGAACAAAGGAGAGACTCTGGCTATTGTTGGAGAGTCAGGTTCAGGTAAATCAGTAACAACAC
GTACGCTAATGGGCTTAAATGCAAAAAATGCACATTTGTCAGGTAAGATTCATTTTAAAGATAAAGACTTGAGCGAGTTG
TCAGAGAGTGAGTGGGTAAAAGTTCGTGGAAATGAAATTGCCATGATTTTCCAAGATCCAATGACAAGTTTAGATCCAAC
AATGACCATTGGAATGCAAATTGCTGAGCCAATTATGTTGCACGAAAAAGTATCGAAATCAGAGGCCTTGAAACGTGCCT
TGGAACTCATGAAAAAGGTTGGTATTCCAAATGCTGAAGAGCACATTAAAGATTATCCACATCAGTGGTCAGGTGGGATG
CGTCAACGTGCAGTCATTGCGATTGCACTTGCAGCGAATCCAGAAATTCTAATTGCGGATGAACCAACAACTGCCTTAGA
CGTGACGATTCAAGCGCAAATTTTGAATTTGATGAAAGAAATACAGTCTCAAACACAGTCTTCTATTATCTTTATTACCC
ATGATTTGGGTGTGGTAGCTGGTATGGCAGACCGTGTAGCTGTTATGTATGCAGGGAAGATTGTGGAAGTTGGAACGGTT
GAGGAAGTATTTTATAATCCGCAACATCCTTACACATGGGGGTTATTAAACTCTATGCCGACAACAGAGACTGCTTCTGG
AAGTTTGGAATCCATTCCTGGAACTCCTCCAGATTTGTTGAACCCTCCTGTTGGAGATGCTTTTGCAGCCAGAAATGCAT
ATGCTCTCGATATTGATTTTGAAGAGCAACCGCCAATGTTCCAAATTTCAGATAGCCATTATGCAGCAACATGGTTGTTA
GATGAGCGAGCTCCTGAAATTACACCACCGTTAGCAATCTTGAAACGTTGGGAAAAATGGAATAGTAAGAAGGAGAAACA
ATGA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (27-183)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (235-296)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
oppD	Streptococcus mutans UA159	81.579	98.559	0.804
amiE	Streptococcus salivarius strain HSISS4	56.765	97.983	0.556
amiE	Streptococcus thermophilus LMG 18311	56.471	97.983	0.553
amiE	Streptococcus thermophilus LMD-9	56.471	97.983	0.553