Detailed information NTG1059218

Bioinformatically predicted

Overview

• Name: clpE
• Type: Regulator
• Locus tag: ACFKHJ_RS08345
• Genome accession: NZ_CP170759
• Coordinates: 1593806..1596052 (+)
• Length: 748 a.a.
• NCBI ID: WP_392452434.1
• Uniprot ID: -
• Organism: Streptococcus parasuis strain FZ1
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 1588806..1601052

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACFKHJ_RS08320	-	1589742..1590650 (+)	909	WP_171989204.1	neutral zinc metallopeptidase	-
ACFKHJ_RS08325	-	1590732..1591583 (-)	852	WP_130554559.1	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	-
ACFKHJ_RS08330	-	1591712..1592446 (-)	735	WP_174845581.1	amino acid ABC transporter ATP-binding protein	-
ACFKHJ_RS08335	-	1592454..1593128 (-)	675	WP_171989206.1	amino acid ABC transporter permease	-
ACFKHJ_RS08340	-	1593247..1593477 (-)	231	WP_024392448.1	DUF1797 family protein	-
ACFKHJ_RS08345	clpE	1593806..1596052 (+)	2247	WP_392452434.1	AAA family ATPase	Regulator
ACFKHJ_RS08350	-	1596199..1596666 (+)	468	WP_174845583.1	NUDIX hydrolase	-
ACFKHJ_RS08355	-	1596713..1597021 (+)	309	WP_392452436.1	DUF1827 family protein	-
ACFKHJ_RS08360	ileS	1597084..1599873 (-)	2790	WP_392453247.1	isoleucine--tRNA ligase	-
ACFKHJ_RS08365	-	1599884..1600327 (-)	444	WP_171989210.1	GNAT family N-acetyltransferase	-

Sequence

Protein

• Length: 748 a.a.
• Molecular weight: 83374.85 Da
• Isoelectric Point: 5.2853

>NTDB_id=1059218 ACFKHJ_RS08345 WP_392452434.1 1593806..1596052(+) (clpE) [Streptococcus parasuis strain FZ1]
MLCTNCKINDATIHLYTNMNGKQQKVDLCHNCYQIMKTDPNNAILRGLGENLTNPNNMDPFSEFFNHLGGYPGNTPAGKN
RDQTPPTQAGGGNGGGRFNQPNVGQTQTVPQPNGLLEEFGINVTEIARRGDIDPVIGRDQEITRVIEILNRRTKNNPVLI
GEPGVGKTAVVEGLAQKIVDGDVPHKLQNKEVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRNRREVILFIDEIHEIVGA
GSAGDGNMDAGNILKPALARGEMQLVGATTLNEYRIIEKDAALERRMQPVKVDEPSVEETITILKGIQNKYQDYHHVKYS
PEAIEAAAVLSNRYIQDRFLPDKAIDLLDEAGSKMNLTLNFVDPKEIDQRLIDAENRKEQATRDEDYEKAAYYRDQIAKY
KEMQKATISEEDIPLITEKEIEAIIEQKTNIPVGELKEKEQSQLIHLASDLKAHVIGQDDAVDKIAKAIRRNRVGLGAPN
RPIGSFLFVGPTGVGKTELSKQLAIELFGSADSMIRFDMSEYMEKHAVAKLVGAPPGYVGYEEAGQLTEKVRRNPYSLIL
LDEVEKAHPDVMHMFLQVLDDGRLTDGQGRTVSFKDTIIIMTSNAGTGKVEASVGFGAAMEGRTQSVLGQLGNFFTPEFM
NRFDGIIEFQPLSKENLLQIVSLMLEDVNRRLSTNGIRLHVTDKVKEKLVDLGYDPKMGARPLRRTIQDQIEDAITDFYL
ENPNEKDLRAVMTNKGTIQIKAQPPKEK

Nucleotide

• Length: 2247 bp

>NTDB_id=1059218 ACFKHJ_RS08345 WP_392452434.1 1593806..1596052(+) (clpE) [Streptococcus parasuis strain FZ1]
ATGCTCTGTACAAACTGTAAAATAAATGATGCTACCATTCATCTCTATACAAATATGAATGGCAAACAACAGAAAGTTGA
CCTTTGCCATAATTGTTATCAAATTATGAAAACAGATCCAAATAATGCTATCTTACGTGGCTTAGGGGAGAACTTAACTA
ATCCAAACAATATGGATCCCTTTAGTGAATTTTTCAATCATTTAGGTGGTTACCCTGGTAATACCCCGGCTGGTAAGAAT
CGAGATCAAACACCTCCTACTCAAGCAGGCGGTGGCAACGGTGGTGGTCGATTCAATCAACCAAATGTGGGTCAAACCCA
AACAGTCCCACAACCAAATGGATTGCTGGAAGAATTTGGGATTAATGTTACTGAGATTGCACGACGTGGAGATATTGACC
CCGTTATCGGACGCGATCAAGAAATCACTCGGGTGATTGAAATTTTGAACCGTCGCACCAAAAACAACCCCGTTCTTATC
GGTGAGCCCGGTGTTGGTAAAACTGCAGTCGTTGAAGGACTAGCACAAAAAATTGTAGACGGGGACGTTCCACATAAACT
TCAAAACAAAGAAGTCATTCGATTAGACGTTGTCAGCCTTGTTCAAGGAACAGGAATCCGAGGTCAATTTGAAGAACGCA
TGCAAAAACTCATGGAAGAAATTCGGAACCGACGTGAAGTTATTCTCTTCATTGATGAAATTCATGAGATTGTCGGAGCT
GGTTCTGCAGGAGATGGAAACATGGATGCCGGCAATATTCTAAAACCCGCCCTCGCTCGTGGTGAAATGCAACTGGTCGG
TGCTACTACTTTAAATGAATACCGCATTATTGAAAAAGATGCAGCTCTTGAACGTCGGATGCAACCTGTAAAAGTTGACG
AACCAAGTGTTGAAGAAACAATCACTATCTTAAAAGGTATTCAGAATAAATACCAAGACTACCACCATGTAAAATATTCC
CCTGAGGCAATTGAAGCTGCGGCCGTATTATCCAACCGCTATATTCAAGACCGATTCTTACCTGATAAAGCGATTGATTT
GCTAGACGAAGCTGGATCAAAAATGAACTTAACCTTGAACTTCGTAGATCCTAAAGAAATTGACCAACGGTTAATTGATG
CCGAAAATCGTAAAGAACAAGCAACTCGTGATGAAGATTACGAAAAAGCTGCCTATTATCGTGACCAAATTGCTAAATAT
AAAGAAATGCAAAAGGCAACGATTAGTGAGGAGGATATTCCTCTCATTACCGAAAAAGAAATCGAAGCCATCATTGAACA
AAAAACAAATATCCCCGTTGGCGAGCTGAAAGAAAAAGAACAGTCTCAATTGATACATTTGGCAAGTGATCTCAAAGCGC
ATGTCATTGGACAAGACGATGCTGTTGATAAGATTGCAAAAGCAATCCGTCGCAATCGTGTAGGACTTGGAGCACCAAAT
CGTCCAATTGGTTCCTTCTTATTCGTAGGACCTACTGGCGTCGGTAAAACAGAATTATCAAAACAATTAGCCATTGAGCT
CTTCGGTTCAGCGGACAGCATGATTCGATTTGATATGTCTGAATATATGGAAAAACACGCAGTTGCAAAACTAGTCGGTG
CCCCTCCTGGATATGTGGGGTATGAAGAAGCTGGCCAACTAACAGAAAAAGTCCGTCGCAATCCATACTCACTCATTCTC
CTTGATGAAGTTGAAAAGGCGCATCCAGATGTGATGCACATGTTCCTACAAGTTCTTGATGACGGTCGACTGACAGATGG
ACAAGGGCGAACAGTTAGCTTCAAAGATACCATTATCATTATGACTTCAAATGCTGGTACAGGTAAGGTTGAGGCCAGCG
TGGGATTTGGAGCCGCTATGGAAGGTCGTACACAATCTGTTCTTGGCCAACTCGGTAATTTCTTCACTCCCGAATTCATG
AACCGCTTCGATGGAATTATTGAATTCCAACCACTATCAAAAGAAAATCTGCTCCAAATTGTCAGTCTCATGCTGGAAGA
CGTCAACCGTCGCTTATCTACAAACGGTATTCGACTACATGTGACCGATAAAGTAAAGGAAAAATTAGTTGATCTTGGTT
ACGATCCTAAAATGGGTGCACGTCCCCTTCGCAGGACCATTCAAGACCAAATTGAAGATGCCATTACCGATTTCTATTTA
GAGAATCCTAATGAGAAAGATTTACGAGCTGTCATGACCAATAAAGGCACCATTCAAATCAAAGCTCAACCGCCAAAAGA
AAAATAA

Domains

Predicted by InterproScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (481-644)

• AAA lid domain (AAA_lid_9) (296-394)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (652-724)

• ATPase family associated with various cellular activities (AAA) (AAA) (158-277)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpE	Streptococcus pneumoniae Rx1	82.846	100	0.833
clpE	Streptococcus pneumoniae D39	82.846	100	0.833
clpE	Streptococcus pneumoniae R6	82.846	100	0.833
clpE	Streptococcus pneumoniae TIGR4	82.846	100	0.833
clpE	Streptococcus mutans UA159	83.221	99.599	0.829
clpC	Lactococcus lactis subsp. cremoris KW2	76.575	97.594	0.747
clpC	Bacillus subtilis subsp. subtilis str. 168	52.167	83.289	0.434
clpC	Streptococcus pneumoniae D39	47.087	84.893	0.4
clpC	Streptococcus pneumoniae Rx1	47.087	84.893	0.4
clpC	Streptococcus pneumoniae TIGR4	47.087	84.893	0.4
clpC	Streptococcus mutans UA159	47.235	84.626	0.4
clpC	Streptococcus thermophilus LMD-9	46.688	84.759	0.396
clpC	Streptococcus thermophilus LMG 18311	46.372	84.759	0.393
clpC	Lactococcus lactis subsp. lactis strain DGCC12653	46.361	84.492	0.392