Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | ACFKHJ_RS01100 | Genome accession | NZ_CP170759 |
| Coordinates | 198058..200511 (+) | Length | 817 a.a. |
| NCBI ID | WP_239604461.1 | Uniprot ID | - |
| Organism | Streptococcus parasuis strain FZ1 | ||
| Function | degradation of ComW (predicted from homology) Competence regulation |
||
Genomic Context
Location: 193058..205511
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACFKHJ_RS01075 | - | 193786..194769 (+) | 984 | WP_216806175.1 | DUF4767 domain-containing protein | - |
| ACFKHJ_RS01080 | rpsB | 194969..195745 (+) | 777 | WP_171989595.1 | 30S ribosomal protein S2 | - |
| ACFKHJ_RS01085 | tsf | 195901..196941 (+) | 1041 | WP_174846563.1 | translation elongation factor Ts | - |
| ACFKHJ_RS01090 | - | 197102..197440 (-) | 339 | WP_174846564.1 | thioredoxin domain-containing protein | - |
| ACFKHJ_RS01095 | - | 197594..198052 (+) | 459 | WP_171989598.1 | CtsR family transcriptional regulator | - |
| ACFKHJ_RS01100 | clpC | 198058..200511 (+) | 2454 | WP_239604461.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| ACFKHJ_RS01105 | - | 200640..201677 (+) | 1038 | WP_239604463.1 | AAA family ATPase | - |
| ACFKHJ_RS01110 | pnuC | 201687..202502 (+) | 816 | WP_392452761.1 | nicotinamide riboside transporter PnuC | - |
| ACFKHJ_RS01115 | - | 202495..203277 (+) | 783 | WP_239604465.1 | NUDIX domain-containing protein | - |
| ACFKHJ_RS01120 | dusB | 203311..204315 (-) | 1005 | WP_239604467.1 | tRNA dihydrouridine synthase DusB | - |
| ACFKHJ_RS01125 | hslO | 204308..205174 (-) | 867 | WP_239604468.1 | Hsp33 family molecular chaperone HslO | - |
Sequence
Protein
Download Length: 817 a.a. Molecular weight: 90572.99 Da Isoelectric Point: 5.6799
>NTDB_id=1059192 ACFKHJ_RS01100 WP_239604461.1 198058..200511(+) (clpC) [Streptococcus parasuis strain FZ1]
MKFSTGLQRVFEDAQLIAQRYACDHLETWHILLAFVINHDTVAGAVLAEYPMSISDFEHATFVVTEKVYREELDKFNVLS
SSKRLEDTAQFARKIAEVVKAKELGSEHLFQAMLLDKRSTASQILDKVGFHFEEIEDEFRFVDLRKNLEYRAGFTKEDLK
AIRSVMKGGKAKTASVGQMMGMPPTAQSGGLEDYTRDLTALAREGKIEPVIGRDAEISRMIQILSRKTKNNPVLVGDAGV
GKTALALGLAQRVAEGDVPVSLAKMRVLELDLMNVIAGTRFRGDFEERMNNIINDIEEDGQVILFIDELHTIMGSGSGID
STLDAANILKPALARGTLRTVGATTQDEYQKHIEKDAALVRRFAKVTIEEPTVEDSIAILTGLKGTFEKYHRVRIGDAAV
ETAVAYAKRYLTSKNLPDSAIDLLDEASATVQNRVKGQVEETGLSSIDKALMAGKYKTVSKLLIKTTEKNLLSQNDDLEV
TEDDILETLSRLSGIPVAKLSQSDTKKYLNLEAELHKRVIGQEEAISAVSRAIRRNQSGIRTGRRPIGSFMFLGPTGVGK
TELAKALAEVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLL
QVLDDGVLTDSKGRKVDFSNTVIIMTSNLGATALRDDKTVGFGAADLSKDHKEVEKRIFEELKKTYRPEFINRIDEKVVF
HSLTESDMLDVVKVMVKPLIVVAASKGILLKFQPSALKLLAKEGYDPEMGARPLRRLLQTKLEDPMAEMLLREDLGAGMV
LKVGVKANQLKFESVNE
MKFSTGLQRVFEDAQLIAQRYACDHLETWHILLAFVINHDTVAGAVLAEYPMSISDFEHATFVVTEKVYREELDKFNVLS
SSKRLEDTAQFARKIAEVVKAKELGSEHLFQAMLLDKRSTASQILDKVGFHFEEIEDEFRFVDLRKNLEYRAGFTKEDLK
AIRSVMKGGKAKTASVGQMMGMPPTAQSGGLEDYTRDLTALAREGKIEPVIGRDAEISRMIQILSRKTKNNPVLVGDAGV
GKTALALGLAQRVAEGDVPVSLAKMRVLELDLMNVIAGTRFRGDFEERMNNIINDIEEDGQVILFIDELHTIMGSGSGID
STLDAANILKPALARGTLRTVGATTQDEYQKHIEKDAALVRRFAKVTIEEPTVEDSIAILTGLKGTFEKYHRVRIGDAAV
ETAVAYAKRYLTSKNLPDSAIDLLDEASATVQNRVKGQVEETGLSSIDKALMAGKYKTVSKLLIKTTEKNLLSQNDDLEV
TEDDILETLSRLSGIPVAKLSQSDTKKYLNLEAELHKRVIGQEEAISAVSRAIRRNQSGIRTGRRPIGSFMFLGPTGVGK
TELAKALAEVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLL
QVLDDGVLTDSKGRKVDFSNTVIIMTSNLGATALRDDKTVGFGAADLSKDHKEVEKRIFEELKKTYRPEFINRIDEKVVF
HSLTESDMLDVVKVMVKPLIVVAASKGILLKFQPSALKLLAKEGYDPEMGARPLRRLLQTKLEDPMAEMLLREDLGAGMV
LKVGVKANQLKFESVNE
Nucleotide
Download Length: 2454 bp
>NTDB_id=1059192 ACFKHJ_RS01100 WP_239604461.1 198058..200511(+) (clpC) [Streptococcus parasuis strain FZ1]
ATGAAATTTTCAACAGGCTTACAACGGGTTTTTGAAGATGCTCAGTTGATTGCCCAACGATATGCATGCGATCATTTAGA
AACGTGGCATATTTTGCTAGCATTTGTCATCAATCACGATACGGTAGCTGGTGCTGTTTTGGCAGAATACCCAATGAGTA
TTTCAGATTTCGAACATGCTACTTTTGTTGTTACAGAAAAAGTATACCGTGAAGAATTGGATAAATTTAATGTTCTATCC
TCCTCAAAAAGATTAGAGGATACAGCTCAGTTCGCTAGAAAGATTGCAGAAGTCGTTAAGGCAAAAGAATTAGGAAGCGA
GCATTTGTTTCAGGCAATGCTGTTAGACAAACGTTCAACCGCAAGTCAAATTCTAGATAAAGTAGGTTTTCATTTTGAAG
AGATAGAAGATGAATTCCGTTTTGTTGATTTGCGTAAAAACTTAGAGTATCGTGCAGGGTTCACCAAAGAGGATTTGAAA
GCTATCCGTAGCGTGATGAAAGGTGGAAAGGCTAAAACAGCAAGTGTAGGTCAAATGATGGGCATGCCACCAACTGCTCA
AAGTGGTGGATTGGAGGATTATACACGAGATCTGACAGCCTTAGCCCGCGAGGGTAAAATTGAACCTGTTATTGGTCGCG
ATGCTGAAATTTCACGGATGATTCAAATTCTATCACGTAAAACGAAGAACAATCCTGTTTTGGTTGGCGATGCAGGTGTT
GGGAAAACAGCACTAGCATTAGGTCTTGCCCAGCGTGTTGCAGAAGGAGATGTTCCTGTCAGTTTAGCAAAGATGCGTGT
TTTGGAACTTGATTTAATGAATGTTATTGCAGGAACTCGTTTCCGTGGTGACTTTGAAGAGCGGATGAATAATATCATCA
ATGATATTGAAGAAGATGGTCAGGTTATCCTCTTTATCGATGAATTACATACTATTATGGGGTCGGGTTCGGGAATTGAT
TCAACCTTAGATGCTGCCAATATTCTCAAACCGGCCTTGGCTCGAGGGACCCTACGCACTGTTGGTGCAACGACACAGGA
TGAATACCAAAAGCATATTGAAAAAGATGCTGCCCTGGTCCGTCGTTTTGCCAAAGTGACCATTGAAGAGCCGACAGTTG
AGGACAGTATTGCCATTTTGACCGGGCTTAAAGGGACTTTTGAAAAATACCATAGGGTCCGTATTGGAGATGCGGCTGTT
GAGACAGCTGTGGCTTACGCCAAGAGGTATCTGACTAGTAAAAACTTGCCAGACTCAGCAATTGACTTGTTAGATGAAGC
CAGTGCAACTGTACAAAATAGAGTGAAAGGGCAGGTTGAAGAAACAGGTCTTTCGAGTATTGATAAAGCTTTGATGGCTG
GAAAATACAAGACTGTCAGTAAGCTCTTAATCAAGACTACAGAAAAGAATCTGTTGAGTCAAAACGATGACTTAGAAGTG
ACAGAAGATGACATTTTGGAAACACTTAGTCGCTTATCAGGTATCCCAGTAGCCAAGCTCAGCCAATCAGATACTAAGAA
GTACCTGAATCTGGAAGCAGAATTGCACAAACGTGTGATTGGGCAGGAAGAAGCTATTTCTGCCGTTAGTAGAGCTATCC
GCCGTAATCAGTCGGGGATTCGGACAGGTCGCAGACCGATTGGTTCCTTTATGTTCTTAGGACCAACTGGTGTCGGTAAG
ACTGAGCTTGCTAAAGCCTTGGCAGAGGTTCTCTTTGATGATGAATCTGCTCTTATCCGTTTTGATATGTCTGAGTATAT
GGAGAAATTTGCGGCCAGCCGTCTCAATGGAGCGCCTCCAGGCTATGTTGGCTATGAAGAAGGTGGCGAATTAACAGAAA
AAGTTCGTAATAAACCTTATTCTGTTCTTCTTTTTGATGAGGTTGAAAAGGCTCATCCAGATATTTTCAATGTTCTCTTG
CAGGTCTTGGATGACGGTGTCTTGACCGATAGTAAGGGTCGCAAGGTTGATTTCTCCAATACAGTCATTATCATGACATC
AAACTTGGGAGCAACAGCTCTTCGCGATGACAAGACTGTTGGGTTTGGTGCGGCTGATCTGTCCAAAGACCACAAGGAAG
TGGAGAAACGCATTTTTGAAGAATTGAAAAAGACCTATCGTCCTGAATTTATCAACCGTATCGATGAAAAGGTAGTCTTC
CACAGCTTGACAGAATCCGATATGTTGGATGTTGTCAAAGTGATGGTGAAGCCATTGATTGTGGTTGCCGCGAGCAAGGG
AATCCTCCTGAAATTCCAACCATCAGCCCTCAAATTGTTGGCCAAAGAAGGCTACGATCCAGAAATGGGTGCTCGCCCTC
TTCGTCGGTTGCTCCAAACAAAATTGGAAGACCCGATGGCAGAAATGCTTTTGCGTGAAGATCTTGGAGCAGGTATGGTT
CTGAAAGTGGGTGTCAAAGCTAACCAACTCAAATTTGAGAGTGTGAATGAATAG
ATGAAATTTTCAACAGGCTTACAACGGGTTTTTGAAGATGCTCAGTTGATTGCCCAACGATATGCATGCGATCATTTAGA
AACGTGGCATATTTTGCTAGCATTTGTCATCAATCACGATACGGTAGCTGGTGCTGTTTTGGCAGAATACCCAATGAGTA
TTTCAGATTTCGAACATGCTACTTTTGTTGTTACAGAAAAAGTATACCGTGAAGAATTGGATAAATTTAATGTTCTATCC
TCCTCAAAAAGATTAGAGGATACAGCTCAGTTCGCTAGAAAGATTGCAGAAGTCGTTAAGGCAAAAGAATTAGGAAGCGA
GCATTTGTTTCAGGCAATGCTGTTAGACAAACGTTCAACCGCAAGTCAAATTCTAGATAAAGTAGGTTTTCATTTTGAAG
AGATAGAAGATGAATTCCGTTTTGTTGATTTGCGTAAAAACTTAGAGTATCGTGCAGGGTTCACCAAAGAGGATTTGAAA
GCTATCCGTAGCGTGATGAAAGGTGGAAAGGCTAAAACAGCAAGTGTAGGTCAAATGATGGGCATGCCACCAACTGCTCA
AAGTGGTGGATTGGAGGATTATACACGAGATCTGACAGCCTTAGCCCGCGAGGGTAAAATTGAACCTGTTATTGGTCGCG
ATGCTGAAATTTCACGGATGATTCAAATTCTATCACGTAAAACGAAGAACAATCCTGTTTTGGTTGGCGATGCAGGTGTT
GGGAAAACAGCACTAGCATTAGGTCTTGCCCAGCGTGTTGCAGAAGGAGATGTTCCTGTCAGTTTAGCAAAGATGCGTGT
TTTGGAACTTGATTTAATGAATGTTATTGCAGGAACTCGTTTCCGTGGTGACTTTGAAGAGCGGATGAATAATATCATCA
ATGATATTGAAGAAGATGGTCAGGTTATCCTCTTTATCGATGAATTACATACTATTATGGGGTCGGGTTCGGGAATTGAT
TCAACCTTAGATGCTGCCAATATTCTCAAACCGGCCTTGGCTCGAGGGACCCTACGCACTGTTGGTGCAACGACACAGGA
TGAATACCAAAAGCATATTGAAAAAGATGCTGCCCTGGTCCGTCGTTTTGCCAAAGTGACCATTGAAGAGCCGACAGTTG
AGGACAGTATTGCCATTTTGACCGGGCTTAAAGGGACTTTTGAAAAATACCATAGGGTCCGTATTGGAGATGCGGCTGTT
GAGACAGCTGTGGCTTACGCCAAGAGGTATCTGACTAGTAAAAACTTGCCAGACTCAGCAATTGACTTGTTAGATGAAGC
CAGTGCAACTGTACAAAATAGAGTGAAAGGGCAGGTTGAAGAAACAGGTCTTTCGAGTATTGATAAAGCTTTGATGGCTG
GAAAATACAAGACTGTCAGTAAGCTCTTAATCAAGACTACAGAAAAGAATCTGTTGAGTCAAAACGATGACTTAGAAGTG
ACAGAAGATGACATTTTGGAAACACTTAGTCGCTTATCAGGTATCCCAGTAGCCAAGCTCAGCCAATCAGATACTAAGAA
GTACCTGAATCTGGAAGCAGAATTGCACAAACGTGTGATTGGGCAGGAAGAAGCTATTTCTGCCGTTAGTAGAGCTATCC
GCCGTAATCAGTCGGGGATTCGGACAGGTCGCAGACCGATTGGTTCCTTTATGTTCTTAGGACCAACTGGTGTCGGTAAG
ACTGAGCTTGCTAAAGCCTTGGCAGAGGTTCTCTTTGATGATGAATCTGCTCTTATCCGTTTTGATATGTCTGAGTATAT
GGAGAAATTTGCGGCCAGCCGTCTCAATGGAGCGCCTCCAGGCTATGTTGGCTATGAAGAAGGTGGCGAATTAACAGAAA
AAGTTCGTAATAAACCTTATTCTGTTCTTCTTTTTGATGAGGTTGAAAAGGCTCATCCAGATATTTTCAATGTTCTCTTG
CAGGTCTTGGATGACGGTGTCTTGACCGATAGTAAGGGTCGCAAGGTTGATTTCTCCAATACAGTCATTATCATGACATC
AAACTTGGGAGCAACAGCTCTTCGCGATGACAAGACTGTTGGGTTTGGTGCGGCTGATCTGTCCAAAGACCACAAGGAAG
TGGAGAAACGCATTTTTGAAGAATTGAAAAAGACCTATCGTCCTGAATTTATCAACCGTATCGATGAAAAGGTAGTCTTC
CACAGCTTGACAGAATCCGATATGTTGGATGTTGTCAAAGTGATGGTGAAGCCATTGATTGTGGTTGCCGCGAGCAAGGG
AATCCTCCTGAAATTCCAACCATCAGCCCTCAAATTGTTGGCCAAAGAAGGCTACGATCCAGAAATGGGTGCTCGCCCTC
TTCGTCGGTTGCTCCAAACAAAATTGGAAGACCCGATGGCAGAAATGCTTTTGCGTGAAGATCTTGGAGCAGGTATGGTT
CTGAAAGTGGGTGTCAAAGCTAACCAACTCAAATTTGAGAGTGTGAATGAATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Streptococcus pneumoniae Rx1 |
71.13 |
99.633 |
0.709 |
| clpC | Streptococcus pneumoniae D39 |
71.13 |
99.633 |
0.709 |
| clpC | Streptococcus pneumoniae TIGR4 |
71.007 |
99.633 |
0.707 |
| clpC | Streptococcus mutans UA159 |
65.767 |
99.755 |
0.656 |
| clpC | Streptococcus thermophilus LMG 18311 |
65.239 |
100 |
0.652 |
| clpC | Streptococcus thermophilus LMD-9 |
65.239 |
100 |
0.652 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
48.619 |
100 |
0.496 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
43.149 |
100 |
0.439 |