Detailed information NTG1058887

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: ACFCQI_RS11450
• Genome accession: NZ_CP170722
• Coordinates: 2567031..2568425 (-)
• Length: 464 a.a.
• NCBI ID: WP_395116778.1
• Uniprot ID: A0AB74UML0
• Organism: Rhodanobacter sp. FW102-FHT14D06
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 2562031..2573425

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACFCQI_RS11435 (ACFCQI_11435)	-	2563005..2564801 (+)	1797	WP_395116772.1	ATP-binding protein	-
ACFCQI_RS11440 (ACFCQI_11440)	-	2564798..2565244 (+)	447	WP_395116774.1	response regulator	-
ACFCQI_RS11445 (ACFCQI_11445)	-	2565321..2566880 (+)	1560	WP_395116776.1	response regulator	-
ACFCQI_RS11450 (ACFCQI_11450)	pilR	2567031..2568425 (-)	1395	WP_395116778.1	sigma-54-dependent transcriptional regulator	Regulator
ACFCQI_RS11455 (ACFCQI_11455)	-	2568517..2570160 (-)	1644	WP_395116780.1	sensor histidine kinase	-
ACFCQI_RS11460 (ACFCQI_11460)	sucC	2570274..2571623 (+)	1350	WP_395116782.1	ADP-forming succinate--CoA ligase subunit beta	-
ACFCQI_RS11465 (ACFCQI_11465)	sucD	2571638..2572510 (+)	873	WP_395116784.1	succinate--CoA ligase subunit alpha	-

Sequence

Protein

• Length: 464 a.a.
• Molecular weight: 49731.92 Da
• Isoelectric Point: 5.2897

>NTDB_id=1058887 ACFCQI_RS11450 WP_395116778.1 2567031..2568425(-) (pilR) [Rhodanobacter sp. FW102-FHT14D06]
MSLQTVLVIDDERDIRELLTITLGRMDLQVEAVGTVADARRALSENSYDLCFTDMRLPDGNGQEIIELIAETCPDTPVAM
ITAYGNVDAAVNALKAGAFDFVSKPVDIQMLRGLVRTALRLAEEKREGGGAAKAGGSGDRLIGDSPAMEQVRATIAKLAR
NQAPVYIAGESGVGKELVARLIHERGPRAGGPFVPVNCGAIPSELMESEFFGHRKGSFTGASADKEGLFQAAQGGTLFLD
EVAELPLHMQVKLLRAIQEKAVRPIGGRDEIPVDVRILSATHKNLGQLVEQGQFRQDLFYRINVIELRVPPLRERRGDVP
QLAAFILKSLAGKSGQEVGRLTPAALDALEAYDFPGNVRELENILERAMAMSDGASIEASDLMLPQRGARPAPTEVAATA
GAPAAAAAAAPSADGGLDDYISNIERTAIVKALEESRYNKTAAARKLGITFRALRYKLKKLGID

Nucleotide

• Length: 1395 bp

>NTDB_id=1058887 ACFCQI_RS11450 WP_395116778.1 2567031..2568425(-) (pilR) [Rhodanobacter sp. FW102-FHT14D06]
ATGAGCCTCCAGACCGTCCTGGTCATCGACGATGAACGCGATATCCGCGAGCTGCTCACCATCACCCTCGGGCGCATGGA
CCTGCAGGTCGAAGCCGTCGGCACCGTCGCCGACGCCCGCCGCGCGCTGAGCGAAAACAGCTACGACCTCTGCTTCACCG
ACATGCGCCTGCCCGACGGCAACGGCCAGGAGATCATCGAGCTGATCGCCGAAACCTGCCCGGACACGCCGGTGGCGATG
ATTACCGCCTACGGCAACGTCGACGCGGCGGTGAACGCGCTCAAGGCCGGCGCGTTCGACTTCGTCTCCAAGCCGGTCGA
CATCCAGATGCTGCGCGGCCTGGTGCGCACCGCGCTGCGGCTGGCCGAGGAGAAGCGCGAAGGCGGCGGCGCCGCCAAGG
CCGGCGGCTCCGGCGACCGCCTGATCGGCGACTCGCCGGCGATGGAACAGGTGCGCGCCACCATCGCCAAGCTGGCACGC
AACCAGGCGCCGGTCTACATCGCCGGTGAATCGGGCGTAGGCAAGGAGCTGGTCGCGCGGCTGATCCACGAGCGCGGTCC
GCGCGCGGGCGGCCCGTTCGTGCCGGTCAACTGCGGCGCGATCCCGTCCGAGCTGATGGAAAGCGAGTTCTTCGGTCATC
GCAAGGGCAGTTTCACCGGCGCCAGCGCGGACAAGGAAGGCCTGTTCCAGGCCGCCCAGGGCGGCACGCTGTTCCTCGAC
GAGGTGGCCGAACTGCCGCTGCACATGCAGGTCAAGCTGCTGCGCGCGATCCAGGAAAAAGCGGTGCGCCCGATCGGCGG
CCGCGACGAGATCCCGGTGGACGTGCGCATCCTCTCGGCCACCCACAAGAACCTCGGCCAACTGGTCGAGCAGGGCCAGT
TCCGCCAGGACCTGTTCTACCGCATCAACGTGATCGAGCTGCGCGTGCCGCCGCTGCGCGAACGCCGCGGCGACGTGCCG
CAGCTGGCCGCGTTCATCCTCAAGTCGCTGGCCGGCAAGAGCGGCCAGGAAGTCGGGCGGCTGACGCCGGCCGCGCTCGA
CGCGCTGGAAGCCTACGACTTCCCCGGCAACGTGCGCGAGCTGGAGAACATCCTCGAACGCGCCATGGCGATGAGCGACG
GCGCCAGCATCGAGGCCTCCGACCTGATGCTGCCCCAGCGCGGCGCGCGCCCGGCGCCGACGGAGGTCGCCGCCACCGCC
GGCGCTCCGGCCGCTGCCGCCGCCGCGGCACCCAGCGCCGATGGCGGGCTGGACGACTACATCAGCAACATCGAGCGCAC
CGCCATCGTCAAGGCGCTGGAAGAATCGCGCTACAACAAGACCGCCGCCGCCCGCAAACTCGGCATCACCTTCCGCGCCC
TGCGCTACAAGCTGAAGAAGCTCGGCATCGACTGA

Domains

Predicted by InterproScan.

• Sigma-54 interaction domain (Sigma54_activat) (141-307)

• Response regulator receiver domain (Response_reg) (6-114)

• Bacterial regulatory protein, Fis family (HTH_8) (422-461)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	60.73	100	0.61
pilR	Acinetobacter baumannii strain A118	48.832	100	0.496