Detailed information NTG1058869

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: ACFYG5_RS12150
• Genome accession: NZ_CP170721
• Coordinates: 2566393..2567787 (+)
• Length: 464 a.a.
• NCBI ID: WP_395116778.1
• Uniprot ID: A0AB74UML0
• Organism: Rhodanobacter sp. FW102-FHT14D07
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 2561393..2572787

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACFYG5_RS12135 (ACFYG5_12135)	sucD	2562308..2563180 (-)	873	WP_395116784.1	succinate--CoA ligase subunit alpha	-
ACFYG5_RS12140 (ACFYG5_12140)	sucC	2563195..2564544 (-)	1350	WP_395116782.1	ADP-forming succinate--CoA ligase subunit beta	-
ACFYG5_RS12145 (ACFYG5_12145)	-	2564658..2566301 (+)	1644	WP_395116780.1	sensor histidine kinase	-
ACFYG5_RS12150 (ACFYG5_12150)	pilR	2566393..2567787 (+)	1395	WP_395116778.1	sigma-54-dependent transcriptional regulator	Regulator
ACFYG5_RS12155 (ACFYG5_12155)	-	2567938..2569497 (-)	1560	WP_395116776.1	response regulator	-
ACFYG5_RS12160 (ACFYG5_12160)	-	2569574..2570020 (-)	447	WP_395116774.1	response regulator	-
ACFYG5_RS12165 (ACFYG5_12165)	-	2570017..2571813 (-)	1797	WP_395116772.1	ATP-binding protein	-

Sequence

Protein

• Length: 464 a.a.
• Molecular weight: 49731.92 Da
• Isoelectric Point: 5.2897

>NTDB_id=1058869 ACFYG5_RS12150 WP_395116778.1 2566393..2567787(+) (pilR) [Rhodanobacter sp. FW102-FHT14D07]
MSLQTVLVIDDERDIRELLTITLGRMDLQVEAVGTVADARRALSENSYDLCFTDMRLPDGNGQEIIELIAETCPDTPVAM
ITAYGNVDAAVNALKAGAFDFVSKPVDIQMLRGLVRTALRLAEEKREGGGAAKAGGSGDRLIGDSPAMEQVRATIAKLAR
NQAPVYIAGESGVGKELVARLIHERGPRAGGPFVPVNCGAIPSELMESEFFGHRKGSFTGASADKEGLFQAAQGGTLFLD
EVAELPLHMQVKLLRAIQEKAVRPIGGRDEIPVDVRILSATHKNLGQLVEQGQFRQDLFYRINVIELRVPPLRERRGDVP
QLAAFILKSLAGKSGQEVGRLTPAALDALEAYDFPGNVRELENILERAMAMSDGASIEASDLMLPQRGARPAPTEVAATA
GAPAAAAAAAPSADGGLDDYISNIERTAIVKALEESRYNKTAAARKLGITFRALRYKLKKLGID

Nucleotide

• Length: 1395 bp

>NTDB_id=1058869 ACFYG5_RS12150 WP_395116778.1 2566393..2567787(+) (pilR) [Rhodanobacter sp. FW102-FHT14D07]
ATGAGCCTCCAGACCGTCCTGGTCATCGACGATGAACGCGATATCCGCGAGCTGCTCACCATCACCCTCGGGCGCATGGA
CCTGCAGGTCGAAGCCGTCGGCACCGTCGCCGACGCCCGCCGCGCGCTGAGCGAAAACAGCTACGACCTCTGCTTCACCG
ACATGCGCCTGCCCGACGGCAACGGCCAGGAGATCATCGAGCTGATCGCCGAAACCTGCCCGGACACGCCGGTGGCGATG
ATTACCGCCTACGGCAACGTCGACGCGGCGGTGAACGCGCTCAAGGCCGGCGCGTTCGACTTCGTCTCCAAGCCGGTCGA
CATCCAGATGCTGCGCGGCCTGGTGCGCACCGCGCTGCGGCTGGCCGAGGAGAAGCGCGAAGGCGGCGGCGCCGCCAAGG
CCGGCGGCTCCGGCGACCGCCTGATCGGCGACTCGCCGGCGATGGAACAGGTGCGCGCCACCATCGCCAAGCTGGCACGC
AACCAGGCGCCGGTCTACATCGCCGGTGAATCGGGCGTAGGCAAGGAGCTGGTCGCGCGGCTGATCCACGAGCGCGGTCC
GCGCGCGGGCGGCCCGTTCGTGCCGGTCAACTGCGGCGCGATCCCGTCCGAGCTGATGGAAAGCGAGTTCTTCGGTCATC
GCAAGGGCAGTTTCACCGGCGCCAGCGCGGACAAGGAAGGCCTGTTCCAGGCCGCCCAGGGCGGCACGCTGTTCCTCGAC
GAGGTGGCCGAACTGCCGCTGCACATGCAGGTCAAGCTGCTGCGCGCGATCCAGGAAAAAGCGGTGCGCCCGATCGGCGG
CCGCGACGAGATCCCGGTGGACGTGCGCATCCTCTCGGCCACCCACAAGAACCTCGGCCAACTGGTCGAGCAGGGCCAGT
TCCGCCAGGACCTGTTCTACCGCATCAACGTGATCGAGCTGCGCGTGCCGCCGCTGCGCGAACGCCGCGGCGACGTGCCG
CAGCTGGCCGCGTTCATCCTCAAGTCGCTGGCCGGCAAGAGCGGCCAGGAAGTCGGGCGGCTGACGCCGGCCGCGCTCGA
CGCGCTGGAAGCCTACGACTTCCCCGGCAACGTGCGCGAGCTGGAGAACATCCTCGAACGCGCCATGGCGATGAGCGACG
GCGCCAGCATCGAGGCCTCCGACCTGATGCTGCCCCAGCGCGGCGCGCGCCCGGCGCCGACGGAGGTCGCCGCCACCGCC
GGCGCTCCGGCCGCTGCCGCCGCCGCGGCACCCAGCGCCGATGGCGGGCTGGACGACTACATCAGCAACATCGAGCGCAC
CGCCATCGTCAAGGCGCTGGAAGAATCGCGCTACAACAAGACCGCCGCCGCCCGCAAACTCGGCATCACCTTCCGCGCCC
TGCGCTACAAGCTGAAGAAGCTCGGCATCGACTGA

Domains

Predicted by InterproScan.

• Sigma-54 interaction domain (Sigma54_activat) (141-307)

• Response regulator receiver domain (Response_reg) (6-114)

• Bacterial regulatory protein, Fis family (HTH_8) (422-461)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	60.73	100	0.61
pilR	Acinetobacter baumannii strain A118	48.832	100	0.496