Detailed information NTG1058641

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: ACFXAA_RS05730
• Genome accession: NZ_CP170717
• Coordinates: 1247354..1248307 (-)
• Length: 317 a.a.
• NCBI ID: WP_015417205.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain JP5014
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1242354..1253307

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACFXAA_RS05700 (ACFXAA_05700)	-	1242508..1243494 (-)	987	WP_224463091.1	ABC transporter ATP-binding protein	-
ACFXAA_RS05705 (ACFXAA_05705)	-	1243668..1244453 (-)	786	WP_012117278.1	DUF2268 domain-containing protein	-
ACFXAA_RS05710 (ACFXAA_05710)	fabF	1244536..1245774 (-)	1239	WP_015417206.1	beta-ketoacyl-ACP synthase II	-
ACFXAA_RS05715 (ACFXAA_05715)	-	1245797..1246735 (-)	939	WP_007409122.1	beta-ketoacyl-ACP synthase III	-
ACFXAA_RS05720 (ACFXAA_05720)	-	1246903..1247121 (+)	219	WP_007409123.1	hypothetical protein	-
ACFXAA_RS05725 (ACFXAA_05725)	comZ	1247150..1247341 (-)	192	WP_395135724.1	ComZ family protein	Regulator
ACFXAA_RS05730 (ACFXAA_05730)	med	1247354..1248307 (-)	954	WP_015417205.1	BMP family ABC transporter substrate-binding protein	Regulator
ACFXAA_RS05735 (ACFXAA_05735)	-	1248397..1248963 (-)	567	WP_015417204.1	NAD(P) binding enzyme	-
ACFXAA_RS05740 (ACFXAA_05740)	-	1249046..1249780 (-)	735	WP_015417203.1	hypothetical protein	-
ACFXAA_RS05745 (ACFXAA_05745)	-	1250041..1250226 (+)	186	WP_003155069.1	YjzD family protein	-
ACFXAA_RS05750 (ACFXAA_05750)	-	1250263..1250442 (-)	180	WP_003155070.1	YjzC family protein	-
ACFXAA_RS05755 (ACFXAA_05755)	argF	1250518..1251489 (-)	972	WP_395135726.1	ornithine carbamoyltransferase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35328.96 Da
• Isoelectric Point: 4.6686

>NTDB_id=1058641 ACFXAA_RS05730 WP_015417205.1 1247354..1248307(-) (med) [Bacillus amyloliquefaciens strain JP5014]
MITRLVMIFSVLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
FHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKSDNVTSVHLMGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYEKPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSNL
GKNTVLTSTVQNVDKAYTLIAEQYNKGSLKSGDHNFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNRTNELPSNE

Nucleotide

• Length: 954 bp

>NTDB_id=1058641 ACFXAA_RS05730 WP_015417205.1 1247354..1248307(-) (med) [Bacillus amyloliquefaciens strain JP5014]
TTGATCACCAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGCGGATGCGCACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACCATCAGTGACTTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCCGATGAAGATATTTTAAAAGCGATAGATGAT
TTTCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATCTTCAATATGATCAGCAAGGATTA
TCCCGACATGGAATTCGTCGTCGCAAACGGAACGGCGAAAAGCGATAATGTCACAAGCGTTCATCTTATGGGAGAAGCAA
TGGGTTTTTTCGGGGGAATGACAGCCGCCCATATGTCAAAAACCAATGAGGTCGGCGTCATCGCCTCCTTTTTGTGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGGGCGAAATATGAAAAGCCTGATATCACCGTCAATACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAGAAGTTAAAAGCGGAAGGCACGGATGTTGTATATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAACAATCGAATCTC
GGCAAAAACACGGTGCTGACAAGCACGGTGCAAAACGTAGATAAAGCCTATACATTAATTGCCGAGCAATATAATAAAGG
TTCGCTCAAGAGCGGAGATCACAACTTTGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCTCTGGTGGACA
AAGCATTTCAAGACAAAATCTCAGACCTTGTCAAAACGTATAACCGAACAAATGAACTGCCGTCAAATGAATAG

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	78.233	100	0.782