Detailed information NTG1058556

Bioinformatically predicted

Overview

• Name: comK/comK1
• Type: Regulator
• Locus tag: ACFDBC_RS08675
• Genome accession: NZ_CP170659
• Coordinates: 1838840..1839415 (-)
• Length: 191 a.a.
• NCBI ID: WP_001829272.1
• Uniprot ID: -
• Organism: Staphylococcus epidermidis strain CCARM 3A600
• Function: promote expression of competence genes (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IS/Tn	1837858..1838145	1838840..1839415	flank	695

Gene organization within MGE regions

Location: 1837858..1839415

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACFDBC_RS08675 (ACFDBC_08675)	comK/comK1	1838840..1839415 (-)	576	WP_001829272.1	competence protein ComK	Regulator

Sequence

Protein

• Length: 191 a.a.
• Molecular weight: 22782.87 Da
• Isoelectric Point: 9.2887

>NTDB_id=1058556 ACFDBC_RS08675 WP_001829272.1 1838840..1839415(-) (comK/comK1) [Staphylococcus epidermidis strain CCARM 3A600]
MTHLPETIYVIRKGDMVIRPKYDEYQQTNGTEIIRFDQTRKESPFKVQRIIERSCKFYGNNYISKKAETNRITGISSKPP
ILLTPLFPTYFFPTHSDRQEENIWINMHYIENVKELKNRKSKIIFANGDSLTLNVSFHSLWHQYTNAIIYYYMVDKQSRM
KSNNPEQPIDYNQSSLNIFEALSRYSLFEEN

Nucleotide

• Length: 576 bp

>NTDB_id=1058556 ACFDBC_RS08675 WP_001829272.1 1838840..1839415(-) (comK/comK1) [Staphylococcus epidermidis strain CCARM 3A600]
ATGACACATTTACCCGAAACGATTTATGTTATACGAAAAGGTGATATGGTAATACGACCTAAATATGATGAATATCAGCA
GACAAATGGTACTGAGATTATCAGATTTGATCAAACCCGCAAAGAAAGTCCATTTAAAGTACAGAGAATTATCGAAAGAT
CATGTAAGTTTTATGGCAATAATTATATTAGTAAAAAAGCAGAAACGAATCGTATTACTGGAATTTCTAGTAAACCACCT
ATTTTACTTACACCTCTTTTTCCTACTTACTTTTTTCCAACTCACTCGGACCGTCAAGAAGAAAATATATGGATTAATAT
GCATTATATTGAAAATGTTAAAGAACTTAAAAATCGTAAGAGTAAAATAATTTTTGCGAATGGTGATTCTTTAACACTCA
ATGTATCATTTCATAGTTTGTGGCATCAATATACGAATGCAATCATCTATTATTACATGGTAGATAAGCAATCACGAATG
AAATCTAACAATCCTGAACAACCTATTGACTATAATCAGTCCTCCTTAAATATTTTCGAGGCGCTTTCACGCTACTCTCT
TTTTGAAGAAAATTAG

Domains

Predicted by InterproScan.

• ComK protein (ComK) (7-158)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comK/comK1	Staphylococcus aureus MW2	76.757	96.859	0.743
comK/comK1	Staphylococcus aureus N315	76.757	96.859	0.743