Detailed information
Bioinformatically predicted
Overview
| Name | rapC | Type | Regulator |
| Locus tag | ACFW99_RS01865 | Genome accession | NZ_CP170651 |
| Coordinates | 401403..402551 (+) | Length | 382 a.a. |
| NCBI ID | WP_033575082.1 | Uniprot ID | - |
| Organism | Bacillus amyloliquefaciens strain JP5025 | ||
| Function | inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation |
||
Genomic Context
Location: 396403..407551
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACFW99_RS01845 (ACFW99_01845) | - | 396800..397483 (-) | 684 | WP_015416808.1 | ABC transporter ATP-binding protein | - |
| ACFW99_RS01850 (ACFW99_01850) | - | 397498..398934 (-) | 1437 | WP_317859602.1 | ABC transporter permease | - |
| ACFW99_RS01855 (ACFW99_01855) | - | 399147..399830 (+) | 684 | WP_007410267.1 | response regulator transcription factor | - |
| ACFW99_RS01860 (ACFW99_01860) | - | 399817..401250 (+) | 1434 | WP_015416810.1 | HAMP domain-containing sensor histidine kinase | - |
| ACFW99_RS01865 (ACFW99_01865) | rapC | 401403..402551 (+) | 1149 | WP_033575082.1 | Rap family tetratricopeptide repeat protein | Regulator |
| ACFW99_RS01870 (ACFW99_01870) | phrC | 402535..402654 (+) | 120 | WP_031378677.1 | PhrC/PhrF family phosphatase-inhibitory pheromone | Regulator |
| ACFW99_RS01875 (ACFW99_01875) | - | 402803..402913 (-) | 111 | WP_369719092.1 | YjcZ family sporulation protein | - |
| ACFW99_RS01880 (ACFW99_01880) | - | 402993..404357 (-) | 1365 | WP_015416811.1 | aspartate kinase | - |
| ACFW99_RS01885 (ACFW99_01885) | ceuB | 404771..405724 (+) | 954 | WP_015239156.1 | ABC transporter permease | Machinery gene |
| ACFW99_RS01890 (ACFW99_01890) | - | 405714..406661 (+) | 948 | WP_014416905.1 | iron chelate uptake ABC transporter family permease subunit | - |
| ACFW99_RS01895 (ACFW99_01895) | - | 406655..407413 (+) | 759 | WP_015416812.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 382 a.a. Molecular weight: 45491.70 Da Isoelectric Point: 4.9916
>NTDB_id=1058384 ACFW99_RS01865 WP_033575082.1 401403..402551(+) (rapC) [Bacillus amyloliquefaciens strain JP5025]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISSCFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISSCFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI
Nucleotide
Download Length: 1149 bp
>NTDB_id=1058384 ACFW99_RS01865 WP_033575082.1 401403..402551(+) (rapC) [Bacillus amyloliquefaciens strain JP5025]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGATTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTATTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACTTTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTATACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCTCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGATTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTATTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACTTTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTATACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCTCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rapC | Bacillus subtilis subsp. subtilis str. 168 |
82.461 |
100 |
0.825 |
| rapF | Bacillus subtilis subsp. subtilis str. 168 |
57.105 |
99.476 |
0.568 |