Detailed information    

insolico Bioinformatically predicted

Overview


Name   degQ   Type   Regulator
Locus tag   ACFXAB_RS07840 Genome accession   NZ_CP170650
Coordinates   1563919..1564059 (+) Length   46 a.a.
NCBI ID   WP_003152043.1    Uniprot ID   A3KLB4
Organism   Bacillus velezensis strain JP5039     
Function   modification of regulators (predicted from homology)   
Competence regulation

Genomic Context


Location: 1558919..1569059
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFXAB_RS07815 (ACFXAB_07815) - 1559222..1559620 (+) 399 WP_003152031.1 YueI family protein -
  ACFXAB_RS07820 (ACFXAB_07820) - 1559717..1560268 (+) 552 WP_003152033.1 cysteine hydrolase family protein -
  ACFXAB_RS07825 (ACFXAB_07825) - 1560286..1561752 (+) 1467 WP_014418767.1 nicotinate phosphoribosyltransferase -
  ACFXAB_RS07830 (ACFXAB_07830) - 1561882..1563105 (+) 1224 WP_014418766.1 EAL and HDOD domain-containing protein -
  ACFXAB_RS07835 (ACFXAB_07835) - 1563112..1563453 (-) 342 WP_014418765.1 hypothetical protein -
  ACFXAB_RS07840 (ACFXAB_07840) degQ 1563919..1564059 (+) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  ACFXAB_RS07845 (ACFXAB_07845) - 1564211..1565116 (+) 906 WP_014418764.1 polyprenyl synthetase family protein -
  ACFXAB_RS07850 (ACFXAB_07850) comX 1565116..1565286 (+) 171 WP_032863917.1 competence pheromone ComX -
  ACFXAB_RS07855 (ACFXAB_07855) comP 1565264..1567615 (+) 2352 WP_269800792.1 sensor histidine kinase Regulator
  ACFXAB_RS07860 (ACFXAB_07860) comA 1567696..1568340 (+) 645 WP_014418762.1 response regulator transcription factor Regulator
  ACFXAB_RS07865 (ACFXAB_07865) - 1568362..1568745 (+) 384 WP_014418761.1 hotdog fold thioesterase -

Sequence


Protein


Download         Length: 46 a.a.        Molecular weight: 5518.30 Da        Isoelectric Point: 4.9432

>NTDB_id=1058328 ACFXAB_RS07840 WP_003152043.1 1563919..1564059(+) (degQ) [Bacillus velezensis strain JP5039]
MENKLEEVKQLLFRLENDIRETTDSLRNINKSIDQLDKFSYAMKIS

Nucleotide


Download         Length: 141 bp        

>NTDB_id=1058328 ACFXAB_RS07840 WP_003152043.1 1563919..1564059(+) (degQ) [Bacillus velezensis strain JP5039]
GTGGAAAACAAATTAGAAGAAGTAAAGCAATTATTATTCCGACTTGAAAATGATATCAGAGAAACAACCGACTCATTACG
AAACATTAACAAAAGCATTGATCAGCTCGATAAATTCTCATATGCAATGAAAATTTCTTAA

Domains


Predicted by InterproScan.

(1-46)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A3KLB4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degQ Bacillus subtilis subsp. subtilis str. 168

89.13

100

0.891


Multiple sequence alignment