Detailed information
Bioinformatically predicted
Overview
| Name | comE1/comEA | Type | Machinery gene |
| Locus tag | O1Q83_RS08365 | Genome accession | NZ_CP170642 |
| Coordinates | 1714427..1714786 (-) | Length | 119 a.a. |
| NCBI ID | WP_132301580.1 | Uniprot ID | A0A4R1KXB2 |
| Organism | Lonepinella koalarum strain ACM3666 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1709427..1719786
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| O1Q83_RS08340 (O1Q83_01644) | - | 1710517..1711878 (+) | 1362 | WP_132301572.1 | sodium-dependent transporter | - |
| O1Q83_RS08345 (O1Q83_01645) | purM | 1712039..1713076 (+) | 1038 | WP_132301574.1 | phosphoribosylformylglycinamidine cyclo-ligase | - |
| O1Q83_RS08350 (O1Q83_01646) | purN | 1713133..1713771 (+) | 639 | WP_132301576.1 | phosphoribosylglycinamide formyltransferase | - |
| O1Q83_RS08355 (O1Q83_01647) | - | 1713821..1714045 (-) | 225 | WP_391540658.1 | type II toxin-antitoxin system YafQ family toxin | - |
| O1Q83_RS08360 (O1Q83_01648) | - | 1714042..1714332 (-) | 291 | WP_132301578.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| O1Q83_RS08365 (O1Q83_01649) | comE1/comEA | 1714427..1714786 (-) | 360 | WP_132301580.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| O1Q83_RS08375 (O1Q83_01651) | dauA | 1715303..1717048 (+) | 1746 | WP_132301582.1 | C4-dicarboxylic acid transporter DauA | - |
| O1Q83_RS08380 (O1Q83_01652) | hisB | 1717155..1718249 (+) | 1095 | WP_132301584.1 | bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB | - |
| O1Q83_RS08385 (O1Q83_01653) | - | 1718325..1718576 (+) | 252 | WP_132301586.1 | antitoxin | - |
| O1Q83_RS08390 (O1Q83_01654) | - | 1718573..1718962 (+) | 390 | WP_132301588.1 | type II toxin-antitoxin system VapC family toxin | - |
| O1Q83_RS08395 (O1Q83_01655) | hisH | 1718984..1719577 (+) | 594 | WP_132301590.1 | imidazole glycerol phosphate synthase subunit HisH | - |
Sequence
Protein
Download Length: 119 a.a. Molecular weight: 12534.43 Da Isoelectric Point: 8.5851
>NTDB_id=1058290 O1Q83_RS08365 WP_132301580.1 1714427..1714786(-) (comE1/comEA) [Lonepinella koalarum strain ACM3666]
MKSIKALLGTITLVGSLLGSTNVLAETTQAVTTPAQQVTVQTVTTETPAQVAVVGDKLNINTASAAEIQKVLTGIGAKKA
EAIVQYREKHGAFTSIEQLLEVQGIGQSTLDKNKDRIIF
MKSIKALLGTITLVGSLLGSTNVLAETTQAVTTPAQQVTVQTVTTETPAQVAVVGDKLNINTASAAEIQKVLTGIGAKKA
EAIVQYREKHGAFTSIEQLLEVQGIGQSTLDKNKDRIIF
Nucleotide
Download Length: 360 bp
>NTDB_id=1058290 O1Q83_RS08365 WP_132301580.1 1714427..1714786(-) (comE1/comEA) [Lonepinella koalarum strain ACM3666]
ATGAAATCTATTAAAGCATTATTAGGTACAATAACATTGGTAGGGTCATTATTAGGCAGTACAAATGTATTAGCAGAGAC
CACACAAGCAGTCACAACACCCGCTCAGCAAGTAACAGTACAAACGGTTACAACTGAAACACCAGCACAAGTTGCGGTAG
TCGGTGATAAATTAAATATAAACACTGCGTCCGCAGCAGAAATTCAAAAAGTCTTAACGGGTATCGGAGCTAAAAAAGCG
GAAGCCATTGTGCAATATCGTGAAAAACACGGTGCTTTCACCTCTATAGAGCAATTATTAGAAGTACAGGGCATTGGTCA
ATCCACTTTAGATAAAAATAAAGATCGGATTATTTTCTAG
ATGAAATCTATTAAAGCATTATTAGGTACAATAACATTGGTAGGGTCATTATTAGGCAGTACAAATGTATTAGCAGAGAC
CACACAAGCAGTCACAACACCCGCTCAGCAAGTAACAGTACAAACGGTTACAACTGAAACACCAGCACAAGTTGCGGTAG
TCGGTGATAAATTAAATATAAACACTGCGTCCGCAGCAGAAATTCAAAAAGTCTTAACGGGTATCGGAGCTAAAAAAGCG
GAAGCCATTGTGCAATATCGTGAAAAACACGGTGCTTTCACCTCTATAGAGCAATTATTAGAAGTACAGGGCATTGGTCA
ATCCACTTTAGATAAAAATAAAGATCGGATTATTTTCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comE1/comEA | Haemophilus influenzae Rd KW20 |
61.864 |
99.16 |
0.613 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
48.624 |
91.597 |
0.445 |