Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ACFMSI_RS05000 | Genome accession | NZ_CP170579 |
| Coordinates | 1051849..1052244 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain JB2E56 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1046849..1057244
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACFMSI_RS04975 (ACFMSI_04975) | - | 1048018..1048422 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| ACFMSI_RS04980 (ACFMSI_04980) | - | 1049075..1049308 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| ACFMSI_RS04985 (ACFMSI_04985) | murA | 1049419..1050684 (+) | 1266 | WP_000358009.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| ACFMSI_RS04990 (ACFMSI_04990) | fabZ | 1050718..1051158 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| ACFMSI_RS04995 (ACFMSI_04995) | - | 1051215..1051655 (-) | 441 | WP_381543621.1 | YwpF-like family protein | - |
| ACFMSI_RS05000 (ACFMSI_05000) | ssb | 1051849..1052244 (+) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| ACFMSI_RS05005 (ACFMSI_05005) | sceD | 1052633..1053328 (+) | 696 | WP_000751995.1 | lytic transglycosylase SceD | - |
| ACFMSI_RS05010 (ACFMSI_05010) | tenA | 1053715..1054404 (+) | 690 | WP_000396068.1 | thiaminase II | - |
| ACFMSI_RS05015 (ACFMSI_05015) | thiD | 1054397..1055227 (+) | 831 | WP_000594965.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| ACFMSI_RS05020 (ACFMSI_05020) | thiM | 1055211..1056002 (+) | 792 | WP_001108486.1 | hydroxyethylthiazole kinase | - |
| ACFMSI_RS05025 (ACFMSI_05025) | thiE | 1056004..1056645 (+) | 642 | WP_000483161.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=1058117 ACFMSI_RS05000 WP_000932694.1 1051849..1052244(+) (ssb) [Staphylococcus aureus strain JB2E56]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=1058117 ACFMSI_RS05000 WP_000932694.1 1051849..1052244(+) (ssb) [Staphylococcus aureus strain JB2E56]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATACACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATACACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |