Detailed information NTG1057941

Bioinformatically predicted

Overview

• Name: comL
• Type: Machinery gene
• Locus tag: ACFJI0_RS09190
• Genome accession: NZ_CP170552
• Coordinates: 1790894..1791658 (-)
• Length: 254 a.a.
• NCBI ID: WP_382324423.1
• Uniprot ID: -
• Organism: Hydrogenophaga sp. UC242_53
• Function: DNA binding (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1785894..1796658

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACFJI0_RS09175 (ACFJI0_09175)	zapE	1786869..1787966 (+)	1098	WP_291119574.1	cell division protein ZapE	-
ACFJI0_RS09180 (ACFJI0_09180)	-	1787975..1788733 (-)	759	WP_291119577.1	PP2C family serine/threonine-protein phosphatase	-
ACFJI0_RS09185 (ACFJI0_09185)	-	1788898..1790931 (+)	2034	WP_382324421.1	ATP-dependent DNA helicase	-
ACFJI0_RS09190 (ACFJI0_09190)	comL	1790894..1791658 (-)	765	WP_382324423.1	outer membrane protein assembly factor BamD	Machinery gene
ACFJI0_RS09195 (ACFJI0_09195)	-	1791775..1792785 (+)	1011	WP_382324425.1	RluA family pseudouridine synthase	-
ACFJI0_RS09200 (ACFJI0_09200)	scpB	1792986..1793732 (+)	747	WP_382324427.1	SMC-Scp complex subunit ScpB	-
ACFJI0_RS09205 (ACFJI0_09205)	-	1793698..1795038 (+)	1341	WP_382324429.1	pseudouridine synthase	-
ACFJI0_RS09210 (ACFJI0_09210)	ndk	1795153..1795578 (+)	426	WP_086123506.1	nucleoside-diphosphate kinase	-

Sequence

Protein

• Length: 254 a.a.
• Molecular weight: 28717.10 Da
• Isoelectric Point: 5.8017

>NTDB_id=1057941 ACFJI0_RS09190 WP_382324423.1 1790894..1791658(-) (comL) [Hydrogenophaga sp. UC242_53]
MASALVLSACSTTPVDETAGWSPNRIYSEATEERAAGNYEKSVTLYEKLEGRAAGTPLAQQAQLDKAYAQYKAGEQAQAL
RTLDRFQKLHPTSPAMDYALYLKGLVNFNDNLGLFGSLARQDLSERDQKAAKESFEAFRELVSRFPDSRYSPDARDRMTY
IVNSLAQYEVHVARYYHSRGAYVAAINRAQTALTDYVNAPALEEALFIMLQSYEALGLTQLRDDTRRVMQASYPNSEYLS
QGFKSKDDPWWKIW

Nucleotide

• Length: 765 bp

>NTDB_id=1057941 ACFJI0_RS09190 WP_382324423.1 1790894..1791658(-) (comL) [Hydrogenophaga sp. UC242_53]
ATGGCCTCGGCGCTGGTGCTCAGCGCATGCAGCACCACGCCCGTGGATGAAACGGCCGGCTGGAGCCCGAACCGAATCTA
CAGCGAAGCGACCGAAGAGCGTGCCGCCGGCAACTACGAGAAGTCGGTGACGCTGTACGAAAAGCTCGAAGGCCGTGCCG
CCGGCACCCCCCTGGCCCAGCAGGCCCAGCTCGACAAGGCTTACGCGCAGTACAAGGCCGGCGAACAAGCCCAGGCGCTG
CGCACCCTCGACCGCTTTCAGAAGCTCCATCCCACCAGCCCGGCGATGGACTATGCCCTGTACCTCAAGGGGCTGGTGAA
TTTCAACGACAACCTCGGCCTCTTCGGCTCGCTGGCGCGTCAGGATCTGTCCGAACGCGATCAGAAAGCCGCCAAGGAAT
CGTTCGAAGCGTTCCGCGAGCTCGTCTCGCGGTTCCCGGATTCCCGCTACAGCCCCGATGCCCGGGACCGCATGACGTAC
ATCGTCAACTCGCTGGCGCAGTACGAGGTCCATGTCGCGCGCTACTACCACAGCCGAGGCGCCTACGTGGCGGCCATCAA
CCGCGCCCAGACGGCCTTGACCGACTACGTCAACGCGCCGGCCCTCGAAGAAGCCCTCTTCATCATGCTGCAGTCCTATG
AGGCGCTGGGCCTGACGCAGCTGCGCGACGACACCCGCCGCGTGATGCAGGCCAGCTACCCGAACAGCGAGTACCTGAGC
CAGGGTTTCAAGTCCAAAGACGATCCCTGGTGGAAGATCTGGTAA

Domains

Predicted by InterproScan.

• Outer membrane lipoprotein (YfiO) (23-226)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comL	Neisseria meningitidis MC58	48.047	100	0.484
comL	Neisseria gonorrhoeae MS11	45.703	100	0.461