Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | ACFJY4_RS17640 | Genome accession | NZ_CP170500 |
| Coordinates | 3740748..3741263 (+) | Length | 171 a.a. |
| NCBI ID | WP_386416365.1 | Uniprot ID | - |
| Organism | Stutzerimonas stutzeri strain MBI-RS3 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3735748..3746263
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACFJY4_RS17615 (ACFJY4_17610) | speA | 3735774..3737687 (-) | 1914 | WP_386413464.1 | arginine decarboxylase | - |
| ACFJY4_RS17620 (ACFJY4_17615) | - | 3737809..3738180 (-) | 372 | WP_386413466.1 | translation initiation factor Sui1 | - |
| ACFJY4_RS17625 (ACFJY4_17620) | thiO | 3738327..3739436 (-) | 1110 | WP_386416362.1 | glycine oxidase ThiO | - |
| ACFJY4_RS17630 (ACFJY4_17625) | - | 3739566..3740066 (+) | 501 | WP_313303981.1 | GspH/FimT family pseudopilin | - |
| ACFJY4_RS17635 (ACFJY4_17630) | - | 3740248..3740742 (+) | 495 | WP_386413468.1 | GspH/FimT family pseudopilin | - |
| ACFJY4_RS17640 (ACFJY4_17635) | pilV | 3740748..3741263 (+) | 516 | WP_386416365.1 | type IV pilus modification protein PilV | Machinery gene |
| ACFJY4_RS17645 (ACFJY4_17640) | - | 3741273..3742100 (+) | 828 | WP_253747463.1 | PilW family protein | - |
| ACFJY4_RS17650 (ACFJY4_17645) | - | 3742097..3742615 (+) | 519 | WP_253747461.1 | PilX N-terminal domain-containing pilus assembly protein | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 18399.13 Da Isoelectric Point: 4.8775
>NTDB_id=1057787 ACFJY4_RS17640 WP_386416365.1 3740748..3741263(+) (pilV) [Stutzerimonas stutzeri strain MBI-RS3]
MIKTPNNRRSSGFSMIEVLVTLVLISIGVLGMVALQARTIQYTQDAVQRNTAAMLANDLVELIRAMPDELTGFYNAAGTT
FPDLPATGCTPLPAKAADQLGCWAEKAKTALPGASDLLASDFYICRTATANTCSGSGDAIEIQLAWRVKEGICENSGDDK
TICYYRLRTQI
MIKTPNNRRSSGFSMIEVLVTLVLISIGVLGMVALQARTIQYTQDAVQRNTAAMLANDLVELIRAMPDELTGFYNAAGTT
FPDLPATGCTPLPAKAADQLGCWAEKAKTALPGASDLLASDFYICRTATANTCSGSGDAIEIQLAWRVKEGICENSGDDK
TICYYRLRTQI
Nucleotide
Download Length: 516 bp
>NTDB_id=1057787 ACFJY4_RS17640 WP_386416365.1 3740748..3741263(+) (pilV) [Stutzerimonas stutzeri strain MBI-RS3]
ATGATTAAAACGCCGAACAACCGTCGCTCGTCGGGCTTCAGCATGATCGAGGTGCTGGTCACGCTCGTGCTGATCAGCAT
AGGTGTACTGGGAATGGTCGCCCTACAGGCCCGCACCATCCAATACACCCAAGACGCCGTGCAACGCAACACCGCCGCCA
TGCTGGCCAACGATCTGGTGGAACTGATACGTGCCATGCCTGATGAGCTAACCGGCTTCTACAACGCGGCAGGCACAACA
TTTCCAGACCTGCCCGCCACAGGCTGTACGCCGTTACCTGCTAAGGCAGCCGACCAATTGGGCTGCTGGGCGGAGAAAGC
CAAAACCGCCCTACCCGGCGCCAGCGATCTGCTGGCCAGCGACTTCTATATCTGTCGTACAGCCACTGCTAACACCTGCA
GCGGCTCTGGCGACGCCATCGAAATTCAGCTCGCCTGGCGCGTCAAGGAAGGCATCTGTGAAAACTCTGGCGATGACAAG
ACCATCTGTTACTACCGCCTGCGCACCCAGATATAG
ATGATTAAAACGCCGAACAACCGTCGCTCGTCGGGCTTCAGCATGATCGAGGTGCTGGTCACGCTCGTGCTGATCAGCAT
AGGTGTACTGGGAATGGTCGCCCTACAGGCCCGCACCATCCAATACACCCAAGACGCCGTGCAACGCAACACCGCCGCCA
TGCTGGCCAACGATCTGGTGGAACTGATACGTGCCATGCCTGATGAGCTAACCGGCTTCTACAACGCGGCAGGCACAACA
TTTCCAGACCTGCCCGCCACAGGCTGTACGCCGTTACCTGCTAAGGCAGCCGACCAATTGGGCTGCTGGGCGGAGAAAGC
CAAAACCGCCCTACCCGGCGCCAGCGATCTGCTGGCCAGCGACTTCTATATCTGTCGTACAGCCACTGCTAACACCTGCA
GCGGCTCTGGCGACGCCATCGAAATTCAGCTCGCCTGGCGCGTCAAGGAAGGCATCTGTGAAAACTCTGGCGATGACAAG
ACCATCTGTTACTACCGCCTGCGCACCCAGATATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Pseudomonas aeruginosa PAK |
53.143 |
100 |
0.544 |