Detailed information NTG1057773

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: ACFJY4_RS08680
• Genome accession: NZ_CP170500
• Coordinates: 1843113..1845338 (+)
• Length: 741 a.a.
• NCBI ID: WP_340067079.1
• Uniprot ID: -
• Organism: Stutzerimonas stutzeri strain MBI-RS3
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1838113..1850338

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACFJY4_RS08650 (ACFJY4_08650)	-	1838262..1838570 (-)	309	WP_011913753.1	hypothetical protein	-
ACFJY4_RS08655 (ACFJY4_08655)	-	1838574..1839209 (-)	636	WP_020307156.1	PilZ domain-containing protein	-
ACFJY4_RS08660 (ACFJY4_08660)	-	1839243..1840490 (+)	1248	WP_020307157.1	lipoprotein-releasing ABC transporter permease subunit	-
ACFJY4_RS08665 (ACFJY4_08665)	lolD	1840498..1841196 (+)	699	WP_013983263.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
ACFJY4_RS08670 (ACFJY4_08670)	-	1841196..1842440 (+)	1245	WP_340067082.1	lipoprotein-releasing ABC transporter permease subunit	-
ACFJY4_RS08675 (ACFJY4_08675)	-	1842453..1842968 (-)	516	WP_011913748.1	DUF2062 domain-containing protein	-
ACFJY4_RS08680 (ACFJY4_08680)	comA	1843113..1845338 (+)	2226	WP_340067079.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
ACFJY4_RS08685 (ACFJY4_08685)	-	1845410..1846042 (+)	633	WP_013983260.1	MotA/TolQ/ExbB proton channel family protein	-
ACFJY4_RS08690 (ACFJY4_08690)	-	1846039..1846467 (+)	429	WP_013983259.1	biopolymer transporter ExbD	-
ACFJY4_RS08695 (ACFJY4_08695)	lpxK	1846467..1847471 (+)	1005	WP_125886268.1	tetraacyldisaccharide 4'-kinase	-
ACFJY4_RS08700 (ACFJY4_08700)	-	1847517..1847702 (+)	186	WP_011913743.1	Trm112 family protein	-
ACFJY4_RS08705 (ACFJY4_08705)	kdsB	1847699..1848463 (+)	765	WP_221292203.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
ACFJY4_RS08710 (ACFJY4_08710)	-	1848465..1848932 (+)	468	WP_014597103.1	low molecular weight protein-tyrosine-phosphatase	-
ACFJY4_RS08715 (ACFJY4_08715)	murB	1848929..1849948 (+)	1020	WP_340067071.1	UDP-N-acetylmuramate dehydrogenase	-

Sequence

Protein

• Length: 741 a.a.
• Molecular weight: 81028.59 Da
• Isoelectric Point: 9.9665

>NTDB_id=1057773 ACFJY4_RS08680 WP_340067079.1 1843113..1845338(+) (comA) [Stutzerimonas stutzeri strain MBI-RS3]
MRTWMLALAAGLVLPRFLPALPAQWFCAALAAVGLLLLLRHRWVAPGLFLLGLSWACYQSQSAIDDRLPASMDGRTFWIE
GRVVGLPSRIGNVVRFELDDIQSRHAGLPSKVRLSWYDGPLLQAGERWRLAARLKRPHGMVNPHAFDYEAWLLARRIGAT
GTIKAGERLTASTASDGWRDQLRARLMAVPASDRQGAIAALVVGDDSGLSRGDWQVLQDTGTVHLMVISGQHIGMLAGLL
YGLVALLARLGAWPRRLPWLPWACGLALSAALAYGWLAGFDVPVRRACLMVTVVLVWRLRFRHLGVWLPLLLALDGVLLI
DPLVTLQPGFWLSFGAVAVLALAFSGRLGSWRWWMALTRAQWAATLGLLPLLLALGLPVSASGPLANLLAVPWVSLTVPF
ALLGTLLLPLAGVGEALLSVVGYSLALLFDVLAAIANWQPAWIAVGLPVWALALIGLGVLLLLLPAGIPLRSLGLLLLLP
LAFPPRVEVPDGWAQVWVLDVGQGLAVLVRTREHALLYDAGPKQGDFDTGERVVVPSLRTLGVTRLDLLLLSHADNDHSG
GADAVQRLLRVDRVVSGEPSRLAPDLGAERCESGSSWQWNDVRFSLWQWQMARDSNQHSCVLQIEANGERILLTGDIDQA
AEQAWLASEQRTPSHWLLLPHHGSRSSSSEPFLRGVASHAALISRSLHNAFGHPHPSVVERLETLNIRAYDTALHGAIRI
ELGSFSPPRLQRSQRRFWREK

Nucleotide

• Length: 2226 bp

>NTDB_id=1057773 ACFJY4_RS08680 WP_340067079.1 1843113..1845338(+) (comA) [Stutzerimonas stutzeri strain MBI-RS3]
ATGCGCACATGGATGCTTGCGCTCGCCGCGGGTCTGGTCCTGCCACGCTTCCTTCCTGCCTTGCCCGCGCAGTGGTTCTG
TGCGGCGCTGGCGGCTGTCGGACTGCTGCTCCTGCTGCGTCACCGCTGGGTGGCGCCGGGCTTGTTTCTGCTGGGCTTGA
GCTGGGCCTGCTACCAGAGCCAGAGCGCCATCGACGACCGCTTGCCGGCGTCCATGGACGGTCGCACCTTTTGGATCGAG
GGGCGGGTAGTGGGGTTGCCCAGTCGTATCGGCAATGTGGTGCGCTTCGAGCTCGACGACATCCAATCGCGGCATGCCGG
GTTGCCATCGAAGGTGCGGCTGTCCTGGTATGACGGTCCGCTGCTGCAAGCCGGCGAGCGCTGGCGCCTGGCGGCGCGAC
TGAAGCGACCGCATGGCATGGTCAATCCCCACGCCTTCGATTACGAAGCCTGGTTGCTGGCGCGACGCATCGGCGCCACG
GGCACGATAAAGGCGGGCGAGCGCCTGACGGCGTCGACGGCAAGCGACGGATGGCGCGATCAGCTTCGGGCGCGGCTCAT
GGCCGTTCCGGCATCCGATCGGCAGGGCGCCATCGCGGCACTGGTGGTGGGTGACGATTCCGGTTTGAGCCGCGGCGACT
GGCAGGTGTTGCAGGACACCGGCACCGTCCACCTGATGGTCATCTCCGGACAGCACATCGGCATGCTGGCGGGGCTGCTC
TATGGTCTGGTCGCATTGCTGGCTCGCCTGGGTGCGTGGCCGCGGCGGTTGCCCTGGTTGCCCTGGGCGTGCGGGCTGGC
GTTAAGCGCTGCGCTGGCCTATGGCTGGCTGGCCGGTTTCGATGTGCCGGTGCGTCGTGCCTGCCTGATGGTGACGGTGG
TGCTTGTCTGGCGATTGCGCTTTCGCCATCTGGGTGTCTGGTTGCCGCTGCTGCTGGCGCTAGATGGCGTCCTGCTGATC
GATCCTCTGGTGACATTGCAGCCCGGGTTCTGGCTGTCGTTTGGAGCGGTGGCGGTTCTGGCATTGGCGTTCTCGGGGCG
GCTCGGCTCATGGCGCTGGTGGATGGCCCTGACCCGGGCGCAGTGGGCGGCCACCCTTGGTCTGCTTCCGCTGTTGCTGG
CCCTCGGATTGCCGGTAAGTGCGAGCGGGCCGCTGGCCAATCTGCTTGCCGTACCCTGGGTGAGTCTGACCGTGCCCTTT
GCGTTGCTCGGTACGCTCCTGCTGCCCTTGGCCGGGGTTGGCGAAGCGCTGCTGTCGGTGGTGGGCTATTCGCTGGCATT
GCTGTTCGACGTCCTGGCGGCGATAGCCAATTGGCAACCCGCCTGGATTGCGGTCGGCCTGCCCGTCTGGGCGCTGGCGT
TAATCGGGCTGGGCGTCCTGTTGCTGTTGCTGCCCGCGGGTATTCCGCTGCGTTCGCTGGGTTTGCTGCTGCTGTTGCCG
CTGGCGTTCCCGCCTCGTGTCGAGGTGCCAGACGGCTGGGCGCAGGTCTGGGTATTGGATGTGGGGCAGGGCCTGGCGGT
GCTTGTACGCACCCGCGAGCATGCACTGCTCTACGATGCCGGGCCGAAGCAGGGCGACTTCGATACGGGCGAGCGGGTGG
TCGTCCCTTCGCTCCGGACCCTTGGCGTGACTCGGTTGGACCTGCTCTTGCTGAGTCATGCCGATAATGATCATTCGGGC
GGTGCGGACGCGGTTCAGCGGTTGCTGAGGGTTGATCGGGTGGTCAGTGGCGAGCCGTCGCGCCTTGCGCCTGATCTGGG
CGCCGAACGTTGCGAAAGCGGTAGCAGCTGGCAGTGGAACGATGTGCGCTTCAGTCTGTGGCAATGGCAGATGGCACGCG
ACAGCAATCAGCACTCCTGCGTGCTGCAAATCGAGGCCAATGGTGAGCGGATCCTGCTCACCGGCGACATCGACCAGGCC
GCGGAGCAGGCATGGCTGGCAAGCGAACAGCGCACCCCATCGCACTGGCTGTTGCTGCCCCACCATGGCAGCCGCAGCTC
GTCGTCAGAACCGTTTCTGCGCGGCGTCGCCTCCCATGCCGCGCTGATCTCGCGCAGCCTGCACAATGCCTTCGGCCACC
CACACCCAAGCGTGGTCGAGCGGCTCGAGACCCTCAATATCCGGGCCTACGACACCGCCTTGCATGGCGCAATCCGCATC
GAGCTGGGAAGCTTTTCGCCTCCTCGGCTACAACGTTCGCAGCGACGATTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (500-673)

• Domain of unknown function (DUF4131) (DUF4131) (23-168)

• Competence protein (Competence) (201-464)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	66.667	96.356	0.642
comA	Ralstonia pseudosolanacearum GMI1000	36.889	100	0.387