Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ACFJY4_RS01570 Genome accession   NZ_CP170500
Coordinates   346219..346626 (+) Length   135 a.a.
NCBI ID   WP_003282729.1    Uniprot ID   -
Organism   Stutzerimonas stutzeri strain MBI-RS3     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 341219..351626
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFJY4_RS01540 (ACFJY4_01540) - 341388..342404 (-) 1017 WP_011914964.1 aspartate carbamoyltransferase catalytic subunit -
  ACFJY4_RS01545 (ACFJY4_01545) pyrR 342458..342973 (-) 516 WP_014597998.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  ACFJY4_RS01550 (ACFJY4_01550) ruvX 342991..343419 (-) 429 WP_011914962.1 Holliday junction resolvase RuvX -
  ACFJY4_RS01555 (ACFJY4_01555) - 343416..343985 (-) 570 WP_011914961.1 YqgE/AlgH family protein -
  ACFJY4_RS01560 (ACFJY4_01560) - 344051..344944 (-) 894 WP_019405529.1 energy transducer TonB -
  ACFJY4_RS01565 (ACFJY4_01565) gshB 345032..345982 (-) 951 WP_013984318.1 glutathione synthase -
  ACFJY4_RS01570 (ACFJY4_01570) pilG 346219..346626 (+) 408 WP_003282729.1 twitching motility response regulator PilG Regulator
  ACFJY4_RS01575 (ACFJY4_01575) pilH 346671..347036 (+) 366 WP_003297216.1 twitching motility response regulator PilH -
  ACFJY4_RS01580 (ACFJY4_01580) - 347078..347614 (+) 537 WP_013984316.1 chemotaxis protein CheW -
  ACFJY4_RS01585 (ACFJY4_01585) - 347693..349741 (+) 2049 WP_011914956.1 methyl-accepting chemotaxis protein -
  ACFJY4_RS01590 (ACFJY4_01590) - 349802..350668 (+) 867 WP_061373090.1 protein-glutamate O-methyltransferase CheR -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14826.22 Da        Isoelectric Point: 7.2439

>NTDB_id=1057767 ACFJY4_RS01570 WP_003282729.1 346219..346626(+) (pilG) [Stutzerimonas stutzeri strain MBI-RS3]
MEQHSEGLKVMVIDDSKTIRRTAETLLKKVGCDVITAVDGFDALAKIADTHPRIIFVDIMMPRLDGYQTCALIKNNSSFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPDFAPVEQAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=1057767 ACFJY4_RS01570 WP_003282729.1 346219..346626(+) (pilG) [Stutzerimonas stutzeri strain MBI-RS3]
ATGGAACAGCACTCCGAGGGCTTGAAGGTCATGGTGATCGACGATTCGAAAACGATTCGTCGCACTGCTGAAACCCTGCT
GAAGAAAGTAGGTTGCGATGTCATCACCGCAGTGGACGGTTTCGATGCCCTCGCCAAGATTGCGGATACTCATCCCCGCA
TCATCTTTGTCGATATTATGATGCCCAGGCTGGACGGTTATCAGACCTGCGCGTTGATCAAGAACAACAGTTCCTTCAAG
TCGACGCCAGTGATCATGCTGTCTTCCAAAGACGGCCTGTTCGACAAGGCGAAGGGGCGCATTGTCGGCTCCGATCAATA
CCTCACCAAACCGTTCAGCAAAGAAGAGCTGCTCGGTGCAATCAAGGCTCATGTCCCTGATTTCGCGCCGGTGGAGCAAG
CGTCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

92.593

0.704
  vicR Streptococcus mutans UA159

42.857

93.333

0.4

Multiple sequence alignment