Detailed information NTG1057700

Bioinformatically predicted

Overview

• Name: pilP
• Type: Machinery gene
• Locus tag: ACFBML_RS14210
• Genome accession: NZ_CP170491
• Coordinates: 3107808..3108323 (-)
• Length: 171 a.a.
• NCBI ID: WP_005451501.1
• Uniprot ID: A0A9X3RXU4
• Organism: Vibrio harveyi strain LcV6
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3102808..3113323

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACFBML_RS14195 (ACFBML_14195)	aroB	3104182..3105282 (-)	1101	WP_009697563.1	3-dehydroquinate synthase	-
ACFBML_RS14200 (ACFBML_14200)	aroK	3105314..3105832 (-)	519	WP_390338159.1	shikimate kinase AroK	-
ACFBML_RS14205 (ACFBML_14205)	pilQ	3106022..3107773 (-)	1752	WP_005451505.1	type IV pilus secretin PilQ	Machinery gene
ACFBML_RS14210 (ACFBML_14210)	pilP	3107808..3108323 (-)	516	WP_005451501.1	pilus assembly protein PilP	Machinery gene
ACFBML_RS14215 (ACFBML_14215)	pilO	3108313..3108906 (-)	594	WP_005451500.1	type 4a pilus biogenesis protein PilO	Machinery gene
ACFBML_RS14220 (ACFBML_14220)	pilN	3108899..3109474 (-)	576	WP_005451499.1	PilN domain-containing protein	Machinery gene
ACFBML_RS14225 (ACFBML_14225)	pilM	3109458..3110474 (-)	1017	WP_026000383.1	type IV pilus assembly protein PilM	Machinery gene
ACFBML_RS14230 (ACFBML_14230)	-	3110653..3113223 (+)	2571	WP_050902270.1	penicillin-binding protein 1A	-

Sequence

Protein

• Length: 171 a.a.
• Molecular weight: 19142.27 Da
• Isoelectric Point: 10.1513

>NTDB_id=1057700 ACFBML_RS14210 WP_005451501.1 3107808..3108323(-) (pilP) [Vibrio harveyi strain LcV6]
MRSKSLLMVCIAGVLTACQANDESLTEFIRDVENQARRDVTKLQPVEEYVVVNYEPEILRAPFELPKEATIATQPVARKD
CWQPPSRKRTGKLERFPLAQLRLKGVMGIGSSVSGLVQAPNGTVYKVKPGQYLGRNNGKVTHVSHNYLLINETLPDGLGC
WQKRKVKLALR

Nucleotide

• Length: 516 bp

>NTDB_id=1057700 ACFBML_RS14210 WP_005451501.1 3107808..3108323(-) (pilP) [Vibrio harveyi strain LcV6]
ATGAGAAGTAAATCTTTGCTGATGGTGTGTATTGCTGGCGTTTTGACTGCCTGCCAAGCCAATGATGAATCACTGACGGA
ATTTATTCGTGACGTGGAGAACCAAGCTCGCCGTGATGTCACCAAACTGCAGCCTGTTGAAGAGTATGTTGTCGTTAATT
ACGAACCCGAAATATTGCGTGCACCTTTCGAATTACCAAAAGAGGCAACGATTGCGACTCAACCTGTTGCAAGAAAAGAC
TGCTGGCAACCTCCTTCAAGAAAGCGAACTGGCAAATTGGAAAGGTTTCCTCTTGCGCAACTGCGCTTGAAGGGTGTGAT
GGGTATCGGCAGCAGTGTTTCTGGGTTGGTTCAGGCTCCGAATGGCACTGTTTACAAAGTAAAACCAGGTCAATACCTCG
GACGCAACAATGGCAAGGTTACCCATGTATCCCACAACTATTTATTGATTAATGAAACCTTGCCAGACGGTTTGGGCTGT
TGGCAAAAACGCAAAGTTAAGTTGGCTTTGAGATAG

Domains

Predicted by InterproScan.

• Pilus assembly protein, PilP (PilP) (25-170)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilP	Vibrio campbellii strain DS40M4	90.058	100	0.901
pilP	Vibrio cholerae strain A1552	59.494	92.398	0.55