Detailed information NTG1057471

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: ACFKQE_RS04915
• Genome accession: NZ_CP170447
• Coordinates: 1029696..1030799 (-)
• Length: 367 a.a.
• NCBI ID: WP_154469316.1
• Uniprot ID: A0AAP6HG83
• Organism: Riemerella anatipestifer strain PAT3
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1024696..1035799

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACFKQE_RS04890 (ACFKQE_04890)	comF	1025894..1026547 (-)	654	WP_004918078.1	ComF family protein	Machinery gene
ACFKQE_RS04900 (ACFKQE_04900)	-	1026769..1027320 (-)	552	WP_229578814.1	hypothetical protein	-
ACFKQE_RS04905 (ACFKQE_04905)	-	1027372..1028022 (-)	651	WP_154469317.1	HD domain-containing protein	-
ACFKQE_RS04910 (ACFKQE_04910)	gdhA	1028154..1029512 (-)	1359	WP_049334426.1	NADP-specific glutamate dehydrogenase	-
ACFKQE_RS04915 (ACFKQE_04915)	dprA	1029696..1030799 (-)	1104	WP_154469316.1	DNA-processing protein DprA	Machinery gene
ACFKQE_RS04920 (ACFKQE_04920)	-	1030802..1031179 (-)	378	WP_154469315.1	group III truncated hemoglobin	-
ACFKQE_RS04925 (ACFKQE_04925)	ruvC	1031190..1031744 (-)	555	WP_161398733.1	crossover junction endodeoxyribonuclease RuvC	-
ACFKQE_RS04930 (ACFKQE_04930)	-	1031802..1032275 (-)	474	WP_264314705.1	Lrp/AsnC family transcriptional regulator	-
ACFKQE_RS04935 (ACFKQE_04935)	-	1032622..1035543 (+)	2922	WP_214244481.1	SusC/RagA family TonB-linked outer membrane protein	-

Sequence

Protein

• Length: 367 a.a.
• Molecular weight: 40407.34 Da
• Isoelectric Point: 6.3958

>NTDB_id=1057471 ACFKQE_RS04915 WP_154469316.1 1029696..1030799(-) (dprA) [Riemerella anatipestifer strain PAT3]
MVNAEEILYSIALRRSPLVGDVTFANLVGEVGSAKEVWSLSQSELRKISGIGKQIASGIGDESLLKFAEREVEFCIKNEI
KINLRHLNQLPRLLGECYDAPAILFQKGDYDDIANNISIVGTRNATAYGKSFLEDLIVQFKNKNIQVISGLALGTDGIAH
QEALKNNIKTSAVLAHGLHIIYPSKHKILAEEILNNGGALFSEFCSDEKPDREHFLQRNRIVAGLSANTIVVESAYAGGS
ISTASFANQYNREVYALAGRLTDKYSQGCNHLIFQNKAKIISSIKGLLKDLDLDNTSKVLELFPSVEVSLTPIQKPIYDI
IKEVNDISLDDLSEKLNQPISKVLPVLLELELLGLIRANSGRRYSIV

Nucleotide

• Length: 1104 bp

>NTDB_id=1057471 ACFKQE_RS04915 WP_154469316.1 1029696..1030799(-) (dprA) [Riemerella anatipestifer strain PAT3]
ATGGTAAATGCAGAAGAAATTTTATATTCTATTGCTTTACGGCGAAGCCCTTTGGTAGGAGATGTTACATTTGCAAATTT
AGTGGGCGAAGTTGGTTCTGCTAAGGAGGTTTGGAGTTTGTCTCAATCGGAGTTAAGAAAAATATCAGGCATAGGTAAAC
AAATTGCCTCAGGTATTGGTGATGAAAGCCTTTTGAAATTTGCCGAAAGGGAAGTTGAGTTCTGCATTAAAAACGAGATA
AAAATCAATCTAAGACATCTTAATCAGCTTCCTCGTCTTTTAGGTGAATGTTATGATGCTCCAGCTATTCTTTTTCAAAA
AGGAGATTATGACGATATTGCTAATAATATTAGCATTGTTGGGACGAGAAATGCCACTGCTTATGGTAAGTCGTTTTTGG
AGGATTTAATTGTTCAGTTTAAAAATAAAAATATTCAAGTCATTAGTGGTTTAGCTTTAGGTACAGACGGAATAGCTCAT
CAAGAGGCTTTAAAAAACAATATAAAAACTTCAGCGGTTTTAGCACACGGTTTACATATCATTTATCCGTCCAAACATAA
AATTCTCGCTGAAGAAATATTAAATAATGGTGGAGCTTTGTTTTCTGAATTCTGCTCTGATGAAAAACCAGATAGAGAAC
ATTTTTTGCAAAGAAATCGTATTGTGGCAGGGCTTTCGGCTAATACGATTGTGGTAGAGTCTGCTTATGCAGGAGGTTCT
ATTAGTACGGCGAGTTTTGCTAATCAGTATAATAGAGAGGTGTACGCTTTGGCAGGGCGTCTTACGGATAAGTACAGCCA
AGGTTGCAATCATCTTATTTTTCAAAATAAAGCTAAAATCATATCTTCTATTAAAGGTTTGCTAAAAGACCTAGATTTGG
ATAATACTTCTAAAGTTTTGGAGCTTTTTCCTTCGGTTGAGGTTTCTTTAACTCCTATTCAGAAGCCTATTTATGATATT
ATTAAAGAGGTTAATGATATTTCTTTGGACGACTTGTCAGAAAAGTTAAATCAACCTATTTCTAAAGTGCTTCCAGTTTT
GTTAGAATTAGAATTATTGGGATTGATAAGGGCAAATTCTGGGAGGAGATATTCTATTGTTTAG

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (77-281)

• DprA winged helix domain (DprA_WH) (309-361)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Riemerella anatipestifer ATCC 11845 = DSM 15868	94.278	100	0.943