Detailed information    

insolico Bioinformatically predicted

Overview


Name   comK/comK1   Type   Regulator
Locus tag   ACFIOK_RS09110 Genome accession   NZ_CP170434
Coordinates   1803549..1804118 (+) Length   189 a.a.
NCBI ID   WP_000287265.1    Uniprot ID   A0A7U7EXU5
Organism   Staphylococcus aureus strain t315     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1798549..1809118
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFIOK_RS09075 - 1799760..1800032 (-) 273 WP_078064810.1 lactococcin 972 family bacteriocin -
  ACFIOK_RS09080 - 1800034..1800144 (-) 111 WP_031865083.1 hypothetical protein -
  ACFIOK_RS09085 - 1800683..1800760 (-) 78 WP_099112139.1 putative holin-like toxin -
  ACFIOK_RS09090 - 1801062..1801664 (-) 603 WP_001033867.1 type II CAAX prenyl endopeptidase Rce1 family protein -
  ACFIOK_RS09095 - 1801679..1801855 (-) 177 WP_000214898.1 YkvS family protein -
  ACFIOK_RS09100 - 1802054..1803040 (+) 987 WP_000668818.1 lipoate--protein ligase -
  ACFIOK_RS09105 - 1803121..1803339 (-) 219 WP_000876826.1 IDEAL domain-containing protein -
  ACFIOK_RS09110 comK/comK1 1803549..1804118 (+) 570 WP_000287265.1 competence protein ComK Regulator
  ACFIOK_RS09125 - 1804605..1806116 (-) 1512 WP_000414184.1 bifunctional metallophosphatase/5'-nucleotidase -
  ACFIOK_RS09130 - 1806255..1807613 (-) 1359 WP_000021870.1 TrkH family potassium uptake protein -

Sequence


Protein


Download         Length: 189 a.a.        Molecular weight: 22601.83 Da        Isoelectric Point: 9.6091

>NTDB_id=1057326 ACFIOK_RS09110 WP_000287265.1 1803549..1804118(+) (comK/comK1) [Staphylococcus aureus strain t315]
MYSQNIYVIRKGDMVIRPAFDDDDQRNGSEIIRFDKTRIQNPFKVQKIIERSCKFYGNTYLGKKAETNRITGISSKPPIL
LTPLFPTYFFPTHSDRQNENIWLNMHYIESIKELKNRKCKVTFINNESIILHVSYHSLWHQYNNSIFYYYMVDKQSRMIS
KNPDQPIDYNKATLNVFEALTRYSLFEDK

Nucleotide


Download         Length: 570 bp        

>NTDB_id=1057326 ACFIOK_RS09110 WP_000287265.1 1803549..1804118(+) (comK/comK1) [Staphylococcus aureus strain t315]
ATGTATTCTCAAAATATTTATGTGATACGCAAAGGAGACATGGTTATTCGACCAGCATTTGATGATGACGATCAAAGAAA
CGGTAGTGAAATAATTCGGTTTGACAAAACGCGTATTCAAAATCCTTTTAAAGTCCAGAAAATCATTGAACGCTCTTGCA
AATTTTATGGTAATACTTATCTTGGCAAGAAAGCAGAGACAAACCGCATTACTGGCATTTCTAGTAAACCACCTATTTTA
CTAACACCATTATTTCCAACTTATTTTTTCCCAACACATTCTGACAGACAAAATGAAAATATTTGGTTAAATATGCATTA
TATCGAAAGTATTAAAGAATTAAAAAATCGTAAATGTAAAGTGACATTTATTAATAATGAATCTATCATTCTTCATGTTT
CATACCACAGTTTATGGCATCAATATAACAATTCCATTTTTTACTATTACATGGTAGATAAACAATCTCGCATGATATCA
AAAAATCCCGACCAACCAATAGATTATAATAAAGCCACATTGAATGTGTTTGAAGCATTGACACGCTATTCTTTATTTGA
AGATAAATAA

Domains


Predicted by InterproScan.

(5-156)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A7U7EXU5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comK/comK1 Staphylococcus aureus MW2

100

100

1

  comK/comK1 Staphylococcus aureus N315

100

100

1


Multiple sequence alignment