Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | ACFIOT_RS06115 | Genome accession | NZ_CP170414 |
| Coordinates | 1196312..1197286 (+) | Length | 324 a.a. |
| NCBI ID | WP_054191886.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain t5047 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1191312..1202286
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACFIOT_RS06080 | rpmG | 1191772..1191921 (+) | 150 | WP_001265709.1 | 50S ribosomal protein L33 | - |
| ACFIOT_RS06085 | - | 1192130..1192669 (+) | 540 | WP_077446656.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| ACFIOT_RS06090 | - | 1192681..1194144 (+) | 1464 | WP_054190029.1 | rhomboid family protein | - |
| ACFIOT_RS06095 | - | 1194125..1194328 (+) | 204 | WP_000087561.1 | YqgQ family protein | - |
| ACFIOT_RS06100 | - | 1194325..1195311 (+) | 987 | WP_000161315.1 | ROK family glucokinase | - |
| ACFIOT_RS06105 | - | 1195311..1195640 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| ACFIOT_RS06110 | - | 1195637..1196260 (+) | 624 | WP_054190028.1 | MBL fold metallo-hydrolase | - |
| ACFIOT_RS06115 | comGA | 1196312..1197286 (+) | 975 | WP_054191886.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| ACFIOT_RS06120 | comGB | 1197258..1198328 (+) | 1071 | WP_054190027.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| ACFIOT_RS06125 | comGC | 1198342..1198653 (+) | 312 | WP_054190026.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| ACFIOT_RS06130 | comGD | 1198631..1199077 (+) | 447 | WP_077446655.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| ACFIOT_RS06135 | comGE | 1199064..1199363 (+) | 300 | WP_054190024.1 | hypothetical protein | Machinery gene |
| ACFIOT_RS06140 | comGF | 1199281..1199778 (+) | 498 | WP_077446653.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| ACFIOT_RS06145 | - | 1199875..1200021 (+) | 147 | WP_001789879.1 | hypothetical protein | - |
| ACFIOT_RS06150 | - | 1200011..1200535 (+) | 525 | WP_054190023.1 | shikimate kinase | - |
| ACFIOT_RS06155 | gcvT | 1200694..1201785 (+) | 1092 | WP_054190022.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 36912.97 Da Isoelectric Point: 8.6529
>NTDB_id=1056976 ACFIOT_RS06115 WP_054191886.1 1196312..1197286(+) (comGA) [Staphylococcus aureus strain t5047]
MKILFQEIINKAIEMKASDVHFIPVKNEVSIKFRINDNLEQYEQIGNSIYQKLLIYMKFQAGLDVSTQQVAQSGRYSYHF
NKIYFLRISTLPLSLGQESCVIRIVPQFFQQQKSTYKFNDFKHLMNKKQGLLLFSGPTGSGKSTLMYQMVSYANKALNLN
VISIEDPVEMQIPGIVQINVNDKAGINYVNSFKAILRCDPDVILIGEIRDKDVAKCVIQASLSGHLVLTTLHATDCKGAI
LRLLEMGISVQELIQATNLIINQRLVTTIKQQRQLVCEILSQQQLRYFFSHDHSLPSSFKNLEDKLDDMTKAGVICETTM
DKYI
MKILFQEIINKAIEMKASDVHFIPVKNEVSIKFRINDNLEQYEQIGNSIYQKLLIYMKFQAGLDVSTQQVAQSGRYSYHF
NKIYFLRISTLPLSLGQESCVIRIVPQFFQQQKSTYKFNDFKHLMNKKQGLLLFSGPTGSGKSTLMYQMVSYANKALNLN
VISIEDPVEMQIPGIVQINVNDKAGINYVNSFKAILRCDPDVILIGEIRDKDVAKCVIQASLSGHLVLTTLHATDCKGAI
LRLLEMGISVQELIQATNLIINQRLVTTIKQQRQLVCEILSQQQLRYFFSHDHSLPSSFKNLEDKLDDMTKAGVICETTM
DKYI
Nucleotide
Download Length: 975 bp
>NTDB_id=1056976 ACFIOT_RS06115 WP_054191886.1 1196312..1197286(+) (comGA) [Staphylococcus aureus strain t5047]
TTGAAGATTCTATTTCAAGAAATAATTAATAAAGCGATAGAAATGAAAGCGAGTGATGTACATTTTATTCCAGTTAAAAA
TGAAGTAAGTATTAAATTTAGAATTAATGATAACTTGGAGCAGTATGAACAAATTGGGAATAGCATTTATCAAAAGTTAT
TAATTTATATGAAGTTTCAAGCTGGGCTTGATGTTTCTACACAGCAAGTCGCACAAAGCGGTCGATATAGTTACCATTTC
AATAAAATATATTTTTTGAGAATATCAACTTTACCATTGTCACTTGGCCAAGAAAGTTGTGTTATCAGAATTGTACCTCA
ATTTTTTCAACAACAGAAATCAACTTATAAATTCAATGATTTTAAACACCTCATGAATAAGAAACAAGGATTACTATTGT
TTAGTGGTCCAACTGGTTCAGGTAAGAGTACATTAATGTATCAAATGGTCTCATACGCGAATAAAGCCTTGAATTTAAAT
GTAATTTCTATAGAGGATCCTGTAGAGATGCAAATTCCTGGTATCGTCCAAATTAATGTGAATGATAAAGCTGGCATTAA
CTATGTAAATTCGTTTAAGGCTATTTTAAGATGTGATCCTGATGTTATTTTAATAGGTGAAATCAGAGATAAGGATGTTG
CCAAGTGTGTTATACAGGCTAGTTTAAGTGGTCACCTTGTTCTGACTACATTGCATGCAACTGATTGTAAAGGTGCTATT
TTAAGGCTATTAGAAATGGGCATTTCTGTACAAGAATTGATACAGGCAACTAACTTAATTATAAACCAACGACTTGTAAC
TACTATTAAGCAACAGCGACAATTAGTATGTGAAATTCTATCTCAGCAACAACTCCGATATTTCTTTTCCCATGATCATT
CATTACCATCATCATTTAAGAACTTAGAAGATAAACTTGATGATATGACAAAAGCAGGTGTCATTTGTGAAACTACAATG
GATAAATACATTTAA
TTGAAGATTCTATTTCAAGAAATAATTAATAAAGCGATAGAAATGAAAGCGAGTGATGTACATTTTATTCCAGTTAAAAA
TGAAGTAAGTATTAAATTTAGAATTAATGATAACTTGGAGCAGTATGAACAAATTGGGAATAGCATTTATCAAAAGTTAT
TAATTTATATGAAGTTTCAAGCTGGGCTTGATGTTTCTACACAGCAAGTCGCACAAAGCGGTCGATATAGTTACCATTTC
AATAAAATATATTTTTTGAGAATATCAACTTTACCATTGTCACTTGGCCAAGAAAGTTGTGTTATCAGAATTGTACCTCA
ATTTTTTCAACAACAGAAATCAACTTATAAATTCAATGATTTTAAACACCTCATGAATAAGAAACAAGGATTACTATTGT
TTAGTGGTCCAACTGGTTCAGGTAAGAGTACATTAATGTATCAAATGGTCTCATACGCGAATAAAGCCTTGAATTTAAAT
GTAATTTCTATAGAGGATCCTGTAGAGATGCAAATTCCTGGTATCGTCCAAATTAATGTGAATGATAAAGCTGGCATTAA
CTATGTAAATTCGTTTAAGGCTATTTTAAGATGTGATCCTGATGTTATTTTAATAGGTGAAATCAGAGATAAGGATGTTG
CCAAGTGTGTTATACAGGCTAGTTTAAGTGGTCACCTTGTTCTGACTACATTGCATGCAACTGATTGTAAAGGTGCTATT
TTAAGGCTATTAGAAATGGGCATTTCTGTACAAGAATTGATACAGGCAACTAACTTAATTATAAACCAACGACTTGTAAC
TACTATTAAGCAACAGCGACAATTAGTATGTGAAATTCTATCTCAGCAACAACTCCGATATTTCTTTTCCCATGATCATT
CATTACCATCATCATTTAAGAACTTAGAAGATAAACTTGATGATATGACAAAAGCAGGTGTCATTTGTGAAACTACAATG
GATAAATACATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
99.383 |
100 |
0.994 |
| comGA | Staphylococcus aureus N315 |
99.383 |
100 |
0.994 |