Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   ACFIOO_RS09885 Genome accession   NZ_CP170406
Coordinates   1993594..1994637 (-) Length   347 a.a.
NCBI ID   WP_001017131.1    Uniprot ID   A0A0D1IMN4
Organism   Staphylococcus aureus strain t21635     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1988594..1999637
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFIOO_RS09855 - 1989018..1990274 (-) 1257 WP_077446664.1 aminopeptidase -
  ACFIOO_RS09860 - 1990277..1990477 (-) 201 WP_000180460.1 DUF1128 family protein -
  ACFIOO_RS09865 - 1990624..1991088 (+) 465 WP_054189636.1 low molecular weight protein-tyrosine-phosphatase -
  ACFIOO_RS09870 - 1991095..1991370 (+) 276 WP_000428172.1 YtxH domain-containing protein -
  ACFIOO_RS09875 - 1991648..1992865 (+) 1218 WP_000037088.1 YihY/virulence factor BrkB family protein -
  ACFIOO_RS09880 vraR 1992975..1993604 (-) 630 WP_000153535.1 two-component system response regulator VraR Regulator
  ACFIOO_RS09885 vraS 1993594..1994637 (-) 1044 WP_001017131.1 sensor histidine kinase Regulator
  ACFIOO_RS09890 liaF 1994634..1995335 (-) 702 WP_000149064.1 cell wall-active antibiotics response protein LiaF -
  ACFIOO_RS09895 - 1995350..1995736 (-) 387 WP_001110179.1 hypothetical protein -
  ACFIOO_RS09900 map 1995953..1996711 (-) 759 WP_000636142.1 type I methionyl aminopeptidase -
  ACFIOO_RS09905 - 1997471..1998457 (+) 987 WP_054189634.1 FUSC family protein -
  ACFIOO_RS09910 - 1998966..1999379 (-) 414 WP_077446671.1 hypothetical protein -
  ACFIOO_RS09915 - 1999408..1999518 (-) 111 WP_001790257.1 hypothetical protein -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40044.52 Da        Isoelectric Point: 6.0577

>NTDB_id=1056866 ACFIOO_RS09885 WP_001017131.1 1993594..1994637(-) (vraS) [Staphylococcus aureus strain t21635]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=1056866 ACFIOO_RS09885 WP_001017131.1 1993594..1994637(-) (vraS) [Staphylococcus aureus strain t21635]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTTATCTTAGTATATAGCATGCTAGCTGCATTTCTGTTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTCTTTTTATTTTTAAATC
TCATCATCATATTATTGTGTATTATTGTTGGTTCGGTACTCGCTTACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACGGTTGGTATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAATTGCATAAGTTGCGACTTAAAACTCAAAACTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAACGACTAGCACGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTATCTGCTATCAAAGAAACAAAGTTAGAACCACCATTAGACCAACAAATTCC
GATTTTAGAGAAAATGGTCCAAGATTCGCAGTTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCACTTGGTTTAAAAG
ACAAATCATTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTGCCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTAGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGACAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D1IMN4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

100

100

1


Multiple sequence alignment