Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   ACFION_RS09695 Genome accession   NZ_CP170399
Coordinates   1905930..1906916 (-) Length   328 a.a.
NCBI ID   WP_000959293.1    Uniprot ID   A0A641A950
Organism   Staphylococcus aureus strain t127     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1900930..1911916
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFION_RS09670 - 1901190..1901537 (-) 348 WP_001242102.1 hypothetical protein -
  ACFION_RS09675 - 1901723..1902316 (+) 594 WP_000224612.1 CYTH domain-containing protein -
  ACFION_RS09680 - 1902420..1902785 (+) 366 WP_000214070.1 truncated hemoglobin YjbI -
  ACFION_RS09685 yjbH 1902808..1903614 (+) 807 WP_000896697.1 protease adaptor protein YjbH -
  ACFION_RS09690 pepF 1904074..1905882 (-) 1809 WP_000082725.1 oligoendopeptidase F -
  ACFION_RS09695 coiA 1905930..1906916 (-) 987 WP_000959293.1 competence protein CoiA Machinery gene
  ACFION_RS09700 mecA 1907037..1907756 (-) 720 WP_001217728.1 adaptor protein MecA -
  ACFION_RS09705 spxA 1908127..1908522 (-) 396 WP_000258003.1 transcriptional regulator SpxA -
  ACFION_RS09710 trpS 1908817..1909806 (+) 990 WP_000448934.1 tryptophan--tRNA ligase -
  ACFION_RS09715 opp4C 1909848..1910729 (-) 882 WP_001180274.1 oligopeptide ABC transporter permease -
  ACFION_RS09720 opp4B 1910741..1911703 (-) 963 WP_000239820.1 oligopeptide ABC transporter permease -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38898.54 Da        Isoelectric Point: 9.7732

>NTDB_id=1056739 ACFION_RS09695 WP_000959293.1 1905930..1906916(-) (coiA) [Staphylococcus aureus strain t127]
MLVALNEEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNETIKHYKSKLILAQMIQQQGFKV
EIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFQSMFINPFTRKL
HTFNLEKKQIMMFQQIQYLGGHKYVAEKRNAKISELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLQ
LTDQEVVHNYGYIFPEQIYIKNHPIEWQLQVDLWLKNGKSKLVNDNLNYFKLKKFIVGLESKTAIIEKLINNYLNICSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=1056739 ACFION_RS09695 WP_000959293.1 1905930..1906916(-) (coiA) [Staphylococcus aureus strain t127]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGTGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCGGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAAACGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATTTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCAAAGTATGTTTATTAATCCATTCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATTTAGGCGGGCACAAATATGTCGCTGA
AAAAAGAAATGCCAAAATTAGTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAGTTCG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAATTACAG
TTAACTGATCAAGAAGTAGTGCACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTAAAAATCATCCTATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAAAAAGCAAATTAGTAAATGACAATCTTAATTATTTTAAACTGAAAA
AGTTTATTGTTGGTCTAGAAAGTAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTTGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(6-306)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A641A950

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus MW2

100

100

1
  coiA Staphylococcus aureus N315

97.561

100

0.976

Multiple sequence alignment