Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   ACFIOP_RS07905 Genome accession   NZ_CP170392
Coordinates   1641444..1642130 (-) Length   228 a.a.
NCBI ID   WP_001802022.1    Uniprot ID   A0A7U7EYP5
Organism   Staphylococcus aureus strain t442     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1636444..1647130
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFIOP_RS07885 rpsT 1637358..1637609 (+) 252 WP_001274017.1 30S ribosomal protein S20 -
  ACFIOP_RS07890 holA 1637654..1638628 (-) 975 WP_001282563.1 DNA polymerase III subunit delta -
  ACFIOP_RS07895 comEC 1638685..1640886 (-) 2202 WP_180991713.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  ACFIOP_RS07900 - 1640891..1641352 (-) 462 WP_000439693.1 ComE operon protein 2 -
  ACFIOP_RS07905 comEA 1641444..1642130 (-) 687 WP_001802022.1 ComEA family DNA-binding protein Machinery gene
  ACFIOP_RS07910 - 1642170..1642886 (-) 717 WP_103152283.1 class I SAM-dependent DNA methyltransferase -
  ACFIOP_RS07915 rsfS 1642889..1643242 (-) 354 WP_103242877.1 ribosome silencing factor -
  ACFIOP_RS07920 yqeK 1643243..1643827 (-) 585 WP_001019324.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  ACFIOP_RS07925 nadD 1643817..1644386 (-) 570 WP_000725167.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  ACFIOP_RS07930 yhbY 1644389..1644679 (-) 291 WP_000955235.1 ribosome assembly RNA-binding protein YhbY -
  ACFIOP_RS07935 aroE 1644683..1645489 (-) 807 WP_000666757.1 shikimate dehydrogenase -
  ACFIOP_RS07940 yqeH 1645503..1646603 (-) 1101 WP_001280137.1 ribosome biogenesis GTPase YqeH -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 25900.65 Da        Isoelectric Point: 9.6751

>NTDB_id=1056647 ACFIOP_RS07905 WP_001802022.1 1641444..1642130(-) (comEA) [Staphylococcus aureus strain t442]
MVLLYQFLLRYKDFLTQWKLYIISAVVLIMVLIGFIFWRQDDYTSRNFENKDTALKQSTSENNSLSKLEDVQVKDGDNSK
NKGPVYVDVKGAVKHPNVYKMTSKDRVVDLLDKAQLLDDADVSRINLSEKLTDQKMIFIPHKGQKNVEPQIEVNSVHVKN
GNTNNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTI

Nucleotide


Download         Length: 687 bp        

>NTDB_id=1056647 ACFIOP_RS07905 WP_001802022.1 1641444..1642130(-) (comEA) [Staphylococcus aureus strain t442]
GTGGTTTTATTGTATCAATTTTTATTACGCTATAAAGATTTTTTAACTCAGTGGAAGTTATATATTATAAGTGCTGTTGT
TTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCAAGAAATTTTGAAAATAAAGATACTG
CTCTGAAACAAAGCACTAGTGAAAATAATAGTTTGTCCAAATTAGAAGATGTCCAGGTCAAAGATGGAGATAATTCCAAA
AATAAAGGTCCTGTATATGTCGATGTAAAAGGTGCTGTTAAACATCCTAATGTTTATAAAATGACATCTAAGGATAGAGT
AGTTGATTTACTTGATAAAGCACAATTATTGGATGATGCAGATGTAAGTCGAATTAATTTGTCTGAAAAATTAACAGATC
AAAAAATGATTTTCATACCTCATAAAGGACAAAAGAATGTTGAACCACAAATTGAAGTAAACAGTGTGCACGTAAAAAAT
GGGAACACAAATAATACTAAAGTAAATTTAAATACCGCATCTGTATCAGAATTGATGTCTGTTCCTGGAGTAGGGCAAGC
TAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTTGAAAAAAGTAAAAGGTT
TTGGAAGTAAAACTTTTGATAAACTGAAATCTTATTTCACGATATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(164-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7EYP5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus N315

100

100

1
  comEA Staphylococcus aureus MW2

97.368

100

0.974

Multiple sequence alignment