Detailed information    

insolico Bioinformatically predicted

Overview


Name   comK/comK1   Type   Regulator
Locus tag   ACFIOJ_RS08855 Genome accession   NZ_CP170391
Coordinates   1775839..1776408 (+) Length   189 a.a.
NCBI ID   WP_000287265.1    Uniprot ID   A0A7U7EXU5
Organism   Staphylococcus aureus strain t21642     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1770839..1781408
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFIOJ_RS08825 - 1772046..1772330 (-) 285 WP_410532597.1 lactococcin 972 family bacteriocin -
  ACFIOJ_RS08830 - 1772931..1773044 (-) 114 WP_142385179.1 putative holin-like toxin -
  ACFIOJ_RS08835 - 1773344..1773946 (-) 603 WP_001033867.1 type II CAAX prenyl endopeptidase Rce1 family protein -
  ACFIOJ_RS08840 - 1773961..1774137 (-) 177 WP_000214898.1 YkvS family protein -
  ACFIOJ_RS08845 - 1774336..1775322 (+) 987 WP_054190346.1 lipoate--protein ligase -
  ACFIOJ_RS08850 - 1775411..1775629 (-) 219 WP_000876826.1 IDEAL domain-containing protein -
  ACFIOJ_RS08855 comK/comK1 1775839..1776408 (+) 570 WP_000287265.1 competence protein ComK Regulator
  ACFIOJ_RS08870 - 1776897..1778407 (-) 1511 Protein_1715 bifunctional metallophosphatase/5'-nucleotidase -
  ACFIOJ_RS08875 - 1778546..1779904 (-) 1359 WP_054190348.1 TrkH family potassium uptake protein -

Sequence


Protein


Download         Length: 189 a.a.        Molecular weight: 22601.83 Da        Isoelectric Point: 9.6091

>NTDB_id=1056611 ACFIOJ_RS08855 WP_000287265.1 1775839..1776408(+) (comK/comK1) [Staphylococcus aureus strain t21642]
MYSQNIYVIRKGDMVIRPAFDDDDQRNGSEIIRFDKTRIQNPFKVQKIIERSCKFYGNTYLGKKAETNRITGISSKPPIL
LTPLFPTYFFPTHSDRQNENIWLNMHYIESIKELKNRKCKVTFINNESIILHVSYHSLWHQYNNSIFYYYMVDKQSRMIS
KNPDQPIDYNKATLNVFEALTRYSLFEDK

Nucleotide


Download         Length: 570 bp        

>NTDB_id=1056611 ACFIOJ_RS08855 WP_000287265.1 1775839..1776408(+) (comK/comK1) [Staphylococcus aureus strain t21642]
ATGTATTCTCAAAATATTTATGTGATACGCAAAGGAGACATGGTTATTCGACCAGCATTTGATGATGACGATCAAAGAAA
TGGTAGTGAAATAATTCGGTTTGACAAAACGCGTATTCAAAATCCTTTTAAAGTCCAGAAAATCATTGAGCGCTCTTGCA
AATTTTATGGTAATACTTATCTTGGCAAGAAAGCAGAGACAAACCGCATTACTGGCATTTCTAGTAAACCACCTATTTTA
CTAACACCATTATTTCCAACTTATTTTTTCCCAACACATTCTGACAGACAAAATGAAAATATTTGGTTAAATATGCATTA
TATCGAAAGTATTAAAGAATTAAAAAATCGTAAATGTAAAGTGACATTTATTAATAATGAATCAATCATTCTTCATGTTT
CATACCACAGTTTATGGCATCAATATAACAATTCCATTTTTTACTATTACATGGTAGATAAACAATCTCGCATGATATCA
AAAAATCCCGATCAACCAATAGATTATAATAAAGCCACATTGAATGTGTTTGAAGCATTGACACGCTATTCTTTATTTGA
AGATAAATAA

Domains


Predicted by InterproScan.

(5-156)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A7U7EXU5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comK/comK1 Staphylococcus aureus MW2

100

100

1

  comK/comK1 Staphylococcus aureus N315

100

100

1


Multiple sequence alignment