Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | ACFIOH_RS06125 | Genome accession | NZ_CP170389 |
| Coordinates | 1192695..1192994 (+) | Length | 99 a.a. |
| NCBI ID | WP_054190024.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain t14667 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1187695..1197994
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACFIOH_RS06085 | - | 1187756..1187959 (+) | 204 | WP_000087561.1 | YqgQ family protein | - |
| ACFIOH_RS06090 | - | 1187956..1188942 (+) | 987 | WP_000161315.1 | ROK family glucokinase | - |
| ACFIOH_RS06095 | - | 1188942..1189271 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| ACFIOH_RS06100 | - | 1189268..1189891 (+) | 624 | WP_054190028.1 | MBL fold metallo-hydrolase | - |
| ACFIOH_RS06105 | comGA | 1189943..1190917 (+) | 975 | WP_054191886.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| ACFIOH_RS06110 | comGB | 1190889..1191959 (+) | 1071 | WP_054190027.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| ACFIOH_RS06115 | comGC | 1191973..1192284 (+) | 312 | WP_054190026.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| ACFIOH_RS06120 | comGD | 1192262..1192708 (+) | 447 | WP_077446655.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| ACFIOH_RS06125 | comGE | 1192695..1192994 (+) | 300 | WP_054190024.1 | hypothetical protein | Machinery gene |
| ACFIOH_RS06130 | comGF | 1192912..1193409 (+) | 498 | WP_077446653.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| ACFIOH_RS06135 | - | 1193506..1193652 (+) | 147 | WP_001789879.1 | hypothetical protein | - |
| ACFIOH_RS06140 | - | 1193642..1194166 (+) | 525 | WP_054190023.1 | shikimate kinase | - |
| ACFIOH_RS06145 | gcvT | 1194325..1195416 (+) | 1092 | WP_054190022.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| ACFIOH_RS06150 | gcvPA | 1195436..1196782 (+) | 1347 | WP_054190021.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11067.12 Da Isoelectric Point: 9.9215
>NTDB_id=1056565 ACFIOH_RS06125 WP_054190024.1 1192695..1192994(+) (comGE) [Staphylococcus aureus strain t14667]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTSVSKINKEELKKGVTIGKYDIKQSDQ
QICATSKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTSVSKINKEELKKGVTIGKYDIKQSDQ
QICATSKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=1056565 ACFIOH_RS06125 WP_054190024.1 1192695..1192994(+) (comGE) [Staphylococcus aureus strain t14667]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTAATCACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGTCTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTACTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTAATCACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGTCTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTACTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
85.088 |
100 |
0.98 |
| comGE | Staphylococcus aureus N315 |
96.97 |
100 |
0.97 |