Detailed information NTG0105641

Bioinformatically predicted

Overview

• Name: Cj0011c
• Type: Machinery gene
• Locus tag: R8569_RS00055
• Genome accession: NZ_AP028413
• Coordinates: 14797..15036 (-)
• Length: 79 a.a.
• NCBI ID: WP_002866798.1
• Uniprot ID: Q3HR28
• Organism: Campylobacter jejuni strain IDH-12448
• Function: DNA binding (predicted from homology) DNA binding and uptake

Genomic Context

Location: 9797..20036

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8569_RS00045 (I12448_00080)	gltD	12743..14188 (+)	1446	WP_002866800.1	glutamate synthase subunit beta	-
R8569_RS00050 (I12448_00090)	rnhB	14189..14764 (-)	576	WP_002866799.1	ribonuclease HII	-
R8569_RS00055 (I12448_00100)	Cj0011c	14797..15036 (-)	240	WP_002866798.1	ComEA family DNA-binding protein	Machinery gene
R8569_RS00060 (I12448_00110)	rrc	15101..15748 (-)	648	WP_002855562.1	ferritin family protein	-
R8569_RS00065 (I12448_00120)	ilvD	15908..17584 (+)	1677	WP_153257457.1	dihydroxy-acid dehydratase	-
R8569_RS00070 (I12448_00130)	-	17596..18120 (-)	525	WP_002866795.1	YagU family protein	-
R8569_RS00075 (I12448_00140)	-	18212..19438 (-)	1227	WP_002866794.1	HD domain-containing protein	-

Sequence

Protein

• Length: 79 a.a.
• Molecular weight: 8854.48 Da
• Isoelectric Point: 10.1677

>NTDB_id=105641 R8569_RS00055 WP_002866798.1 14797..15036(-) (Cj0011c) [Campylobacter jejuni strain IDH-12448]
MKKLLFLFFALTAFLFGAVNINTATLKELKSLNGIGEAKAKSILEYRKEANFTSIDDLKKVKGIGDKLFEKIKNDITVE

Nucleotide

• Length: 240 bp

>NTDB_id=105641 R8569_RS00055 WP_002866798.1 14797..15036(-) (Cj0011c) [Campylobacter jejuni strain IDH-12448]
ATGAAAAAATTACTATTTTTATTTTTTGCTTTAACGGCTTTTCTCTTTGGTGCTGTAAATATCAACACTGCAACGCTAAA
AGAATTAAAAAGTTTAAATGGTATTGGCGAAGCTAAGGCTAAATCGATTTTAGAATACCGCAAAGAAGCAAATTTTACAA
GTATTGATGATCTTAAAAAAGTTAAAGGCATAGGTGATAAGCTTTTTGAAAAAATCAAAAATGATATCACAGTAGAATAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix motif (HHH_3) (18-77)

3D structure

• AlphaFold DB: Q3HR28

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
Cj0011c	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	97.468	100	0.975
comE	Neisseria gonorrhoeae MS11	51.852	100	0.532
comE	Neisseria gonorrhoeae MS11	51.852	100	0.532
comE	Neisseria gonorrhoeae MS11	51.852	100	0.532
comE	Neisseria gonorrhoeae MS11	51.852	100	0.532
comEA	Bacillus subtilis subsp. subtilis str. 168	57.377	77.215	0.443
comEA	Acinetobacter baylyi ADP1	54.098	77.215	0.418
comEA	Staphylococcus aureus MW2	54.098	77.215	0.418
comEA	Staphylococcus aureus N315	54.098	77.215	0.418
comEA/celA/cilE	Streptococcus pneumoniae TIGR4	50.794	79.747	0.405
comEA/celA/cilE	Streptococcus pneumoniae Rx1	50.794	79.747	0.405
comEA/celA/cilE	Streptococcus pneumoniae D39	50.794	79.747	0.405
comEA/celA/cilE	Streptococcus pneumoniae R6	50.794	79.747	0.405
comEA/celA/cilE	Streptococcus mitis NCTC 12261	50.794	79.747	0.405
comEA	Lactococcus lactis subsp. cremoris KW2	51.613	78.481	0.405
comEA	Vibrio cholerae C6706	60.784	64.557	0.392
comEA	Vibrio cholerae strain A1552	60.784	64.557	0.392
comEA/celA/cilE	Streptococcus mitis SK321	49.206	79.747	0.392
comE1/comEA	Haemophilus influenzae Rd KW20	49.153	74.684	0.367
comEA/comE1	Glaesserella parasuis strain SC1401	46.032	79.747	0.367
comEA	Acinetobacter baumannii D1279779	46.032	79.747	0.367
comEA	Vibrio parahaemolyticus RIMD 2210633	48.333	75.949	0.367
comEA	Vibrio campbellii strain DS40M4	48.333	75.949	0.367