Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   ACLV7D_RS05255 Genome accession   NZ_OZ217345
Coordinates   1094931..1095395 (+) Length   154 a.a.
NCBI ID   WP_001135768.1    Uniprot ID   A4L7L7
Organism   Streptococcus mitis isolate S. mitis F22     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1089931..1100395
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLV7D_RS05225 (SMIF22_10220) - 1090594..1091325 (+) 732 WP_218764515.1 hypothetical protein -
  ACLV7D_RS05230 (SMIF22_10230) - 1091489..1092391 (+) 903 WP_218764514.1 hypothetical protein -
  ACLV7D_RS05235 (SMIF22_10240) - 1092910..1093122 (+) 213 WP_225904822.1 hypothetical protein -
  ACLV7D_RS05240 (SMIF22_10250) - 1093171..1093389 (+) 219 WP_225904821.1 hypothetical protein -
  ACLV7D_RS05245 (SMIF22_10260) - 1093514..1094206 (+) 693 WP_218764513.1 YjjG family noncanonical pyrimidine nucleotidase -
  ACLV7D_RS05250 (SMIF22_10270) - 1094268..1094921 (+) 654 WP_218764512.1 uracil-DNA glycosylase -
  ACLV7D_RS05255 (SMIF22_10280) mutX 1094931..1095395 (+) 465 WP_001135768.1 NUDIX hydrolase Machinery gene
  ACLV7D_RS05260 (SMIF22_10290) - 1095408..1096676 (+) 1269 WP_218764511.1 dihydroorotase -
  ACLV7D_RS05265 (SMIF22_10300) - 1096718..1098070 (+) 1353 WP_218764510.1 MATE family efflux transporter -
  ACLV7D_RS05270 (SMIF22_10310) xerS 1098273..1099343 (-) 1071 WP_049491412.1 tyrosine recombinase XerS Machinery gene

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17812.16 Da        Isoelectric Point: 4.2287

>NTDB_id=1056236 ACLV7D_RS05255 WP_001135768.1 1094931..1095395(+) (mutX) [Streptococcus mitis isolate S. mitis F22]
MPQLATICYIDNGKELLMLHRNKKPNDVHEGKWIGVGGKLERGETPQECAAREILEETGLKAKPVLKGVITFPEFTPDLD
WYTYVFKVTEFEGDLIDCNEGTLEWVPYDEVLSKPTWEGDHTFVEWLLEDKPFFSAKFVYDGDKLLDTQVDFYE

Nucleotide


Download         Length: 465 bp        

>NTDB_id=1056236 ACLV7D_RS05255 WP_001135768.1 1094931..1095395(+) (mutX) [Streptococcus mitis isolate S. mitis F22]
ATGCCTCAGTTAGCGACGATTTGCTACATTGATAACGGTAAAGAACTGCTCATGCTTCACCGGAATAAGAAACCAAATGA
TGTTCATGAAGGGAAATGGATTGGTGTGGGTGGTAAGCTAGAGCGTGGTGAGACTCCACAGGAATGTGCAGCGCGTGAAA
TCCTTGAAGAGACAGGGCTCAAAGCCAAGCCAGTTCTAAAAGGTGTCATCACTTTCCCTGAATTTACACCAGATTTAGAC
TGGTACACTTATGTTTTTAAGGTGACGGAGTTTGAGGGTGACTTGATTGACTGCAATGAGGGGACGCTGGAATGGGTTCC
CTATGATGAAGTTTTGAGCAAGCCGACTTGGGAAGGTGACCATACCTTTGTTGAGTGGCTTTTAGAAGATAAACCTTTCT
TTTCAGCCAAGTTTGTTTATGATGGGGATAAATTGTTGGATACCCAAGTTGATTTCTATGAATAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(2-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A4L7L7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

98.701

100

0.987