Detailed information NTG0105606

Bioinformatically predicted

Overview

• Name: CJE0566
• Type: Regulator
• Locus tag: R8953_RS04390
• Genome accession: NZ_AP028409
• Coordinates: 867287..867940 (+)
• Length: 217 a.a.
• NCBI ID: WP_072235909.1
• Uniprot ID: -
• Organism: Campylobacter coli strain IDH-11999
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 862287..872940

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8953_RS04345 (I11999_08660)	-	862513..862893 (-)	381	WP_072235914.1	crossover junction endodeoxyribonuclease RuvA	-
R8953_RS04350 (I11999_08670)	-	862911..863561 (-)	651	WP_072235913.1	hypothetical protein	-
R8953_RS04355 (I11999_08680)	-	863572..864573 (-)	1002	WP_072235912.1	hypothetical protein	-
R8953_RS04360	-	864616..864981 (+)	366	WP_002784008.1	hypothetical protein	-
R8953_RS04365 (I11999_08710)	-	865117..865266 (+)	150	WP_171838372.1	hypothetical protein	-
R8953_RS04370 (I11999_08720)	-	865263..865451 (-)	189	WP_057038126.1	hypothetical protein	-
R8953_RS04375 (I11999_08730)	-	865448..865681 (-)	234	WP_072235911.1	hypothetical protein	-
R8953_RS04380 (I11999_08740)	-	865792..866463 (+)	672	WP_052780014.1	LexA family transcriptional regulator	-
R8953_RS04385 (I11999_08750)	-	866494..867267 (+)	774	WP_072235910.1	hypothetical protein	-
R8953_RS04390 (I11999_08760)	CJE0566	867287..867940 (+)	654	WP_072235909.1	DNA/RNA non-specific endonuclease	Regulator
R8953_RS04395 (I11999_08770)	-	867968..868798 (+)	831	WP_032582836.1	DNA-processing protein DprA	-
R8953_RS04400 (I11999_08780)	-	868795..869397 (+)	603	WP_032582837.1	phosphoribosyltransferase	-
R8953_RS04405 (I11999_08790)	-	869424..870194 (-)	771	WP_072235908.1	SEL1-like repeat protein	-
R8953_RS04410 (I11999_08800)	-	870198..870890 (-)	693	WP_223207056.1	hypothetical protein	-
R8953_RS04415 (I11999_08810)	-	871043..871315 (+)	273	WP_002786773.1	hypothetical protein	-
R8953_RS04420 (I11999_08820)	-	871899..872168 (+)	270	WP_002783984.1	hypothetical protein	-
R8953_RS04425 (I11999_08830)	-	872159..872413 (+)	255	WP_060785271.1	hypothetical protein	-
R8953_RS04430 (I11999_08840)	-	872410..872562 (+)	153	WP_002795985.1	hypothetical protein	-
R8953_RS04435 (I11999_08850)	-	872555..872752 (-)	198	WP_002795988.1	hypothetical protein	-

Sequence

Protein

• Length: 217 a.a.
• Molecular weight: 25503.09 Da
• Isoelectric Point: 9.8592

>NTDB_id=105606 R8953_RS04390 WP_072235909.1 867287..867940(+) (CJE0566) [Campylobacter coli strain IDH-11999]
MKKLILLPLLSTLAFADYTQYKPSEDFAKYLTKQNCSQVLDKFYYLNCYDYNLKGTKAVAYKLEAENLKGEQIKKRPRFE
DDTNIPKKYRTTWSDYKNSGYDRGHTLSNASMRKTTQAQRSTFLMSNITPQNPQINQRVWNKIEKRERQVASKLGSLEVL
NLVNYDNNPQRIRNQIAIPSSYIKILKGENFKECYQVPNHEVEDESIKKYKVNCDKI

Nucleotide

• Length: 654 bp

>NTDB_id=105606 R8953_RS04390 WP_072235909.1 867287..867940(+) (CJE0566) [Campylobacter coli strain IDH-11999]
GTGAAAAAACTCATACTTTTACCATTGTTATCCACTCTAGCTTTTGCTGACTATACGCAATATAAGCCAAGCGAAGATTT
TGCTAAGTATTTGACTAAGCAAAACTGCTCACAAGTTTTAGATAAGTTTTATTATCTAAATTGTTATGATTATAATCTTA
AAGGCACTAAAGCTGTAGCTTATAAACTAGAAGCGGAAAATTTAAAAGGCGAACAAATCAAAAAGCGCCCGCGCTTTGAA
GATGATACAAATATCCCTAAAAAATATCGTACCACTTGGAGTGATTATAAAAATAGTGGTTATGATAGAGGACACACTCT
TTCTAATGCCTCAATGAGAAAAACAACTCAAGCTCAAAGAAGCACATTCTTAATGAGTAATATTACTCCACAAAATCCAC
AAATCAATCAAAGGGTTTGGAACAAGATTGAAAAAAGAGAAAGACAAGTAGCTTCAAAGCTTGGAAGTTTAGAAGTTTTA
AATTTAGTTAATTATGACAATAATCCACAAAGAATAAGAAATCAAATTGCTATTCCAAGCTCTTATATTAAAATCTTAAA
AGGTGAGAATTTTAAAGAATGTTACCAAGTACCAAATCATGAAGTTGAAGATGAGAGTATAAAAAAATATAAGGTTAATT
GTGATAAAATATAA

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (27-217)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
CJE0566	Campylobacter jejuni RM1221	95.853	100	0.959
CJE1441	Campylobacter jejuni RM1221	91.163	99.078	0.903