Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ACFDA7_RS03730 | Genome accession | NZ_CP170247 |
| Coordinates | 810038..810433 (+) | Length | 131 a.a. |
| NCBI ID | WP_002447777.1 | Uniprot ID | - |
| Organism | Staphylococcus epidermidis strain Q10 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 805038..815433
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACFDA7_RS03705 (ACFDA7_03705) | - | 806457..806861 (+) | 405 | WP_002447782.1 | F0F1 ATP synthase subunit epsilon | - |
| ACFDA7_RS03710 (ACFDA7_03710) | - | 807010..807243 (+) | 234 | WP_002495678.1 | DUF1146 family protein | - |
| ACFDA7_RS03715 (ACFDA7_03715) | murA | 807353..808618 (+) | 1266 | WP_002447780.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| ACFDA7_RS03720 (ACFDA7_03720) | fabZ | 808652..809089 (+) | 438 | WP_002447779.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| ACFDA7_RS03725 (ACFDA7_03725) | - | 809407..809847 (-) | 441 | WP_002458706.1 | YwpF-like family protein | - |
| ACFDA7_RS03730 (ACFDA7_03730) | ssb | 810038..810433 (+) | 396 | WP_002447777.1 | single-stranded DNA-binding protein | Machinery gene |
| ACFDA7_RS03735 (ACFDA7_03735) | - | 810821..811480 (+) | 660 | WP_002447776.1 | transglycosylase family protein | - |
| ACFDA7_RS03740 (ACFDA7_03740) | tenA | 811764..812453 (+) | 690 | WP_002447775.1 | thiaminase II | - |
| ACFDA7_RS03745 (ACFDA7_03745) | thiD | 812446..813267 (+) | 822 | WP_002458705.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| ACFDA7_RS03750 (ACFDA7_03750) | thiM | 813260..814048 (+) | 789 | WP_381412638.1 | hydroxyethylthiazole kinase | - |
| ACFDA7_RS03755 (ACFDA7_03755) | thiE | 814054..814692 (+) | 639 | WP_002458704.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15144.99 Da Isoelectric Point: 5.2661
>NTDB_id=1055927 ACFDA7_RS03730 WP_002447777.1 810038..810433(+) (ssb) [Staphylococcus epidermidis strain Q10]
MLNKIVIVGRMTKDAQIYEKEDNKIATFCVATERNYKDDNNEISSDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKNKNNETPSDNQFENNTYQPDDLEIIHI
MLNKIVIVGRMTKDAQIYEKEDNKIATFCVATERNYKDDNNEISSDYLLCKAFGKTATNIEKYTSQGTLVGITGQMRSRK
YEKEGQTHFVTELYVETIKFMSPKNKNNETPSDNQFENNTYQPDDLEIIHI
Nucleotide
Download Length: 396 bp
>NTDB_id=1055927 ACFDA7_RS03730 WP_002447777.1 810038..810433(+) (ssb) [Staphylococcus epidermidis strain Q10]
ATGTTAAATAAAATAGTCATTGTTGGTAGAATGACGAAAGATGCTCAAATATATGAAAAGGAGGATAACAAAATAGCAAC
ATTTTGCGTTGCTACAGAAAGAAACTACAAAGATGATAATAACGAAATTTCTTCAGATTATTTGCTTTGTAAAGCTTTCG
GTAAAACTGCCACTAATATTGAAAAGTACACTAGTCAAGGTACTTTAGTAGGTATAACTGGGCAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGCCAAACACATTTTGTTACAGAATTATACGTTGAAACAATTAAATTCATGTCCCCAAAAAATAAAAA
CAATGAAACTCCCTCTGATAATCAATTTGAAAACAACACTTATCAACCTGATGATTTAGAAATAATTCATATTTAA
ATGTTAAATAAAATAGTCATTGTTGGTAGAATGACGAAAGATGCTCAAATATATGAAAAGGAGGATAACAAAATAGCAAC
ATTTTGCGTTGCTACAGAAAGAAACTACAAAGATGATAATAACGAAATTTCTTCAGATTATTTGCTTTGTAAAGCTTTCG
GTAAAACTGCCACTAATATTGAAAAGTACACTAGTCAAGGTACTTTAGTAGGTATAACTGGGCAAATGCGTTCAAGAAAA
TATGAAAAAGAAGGCCAAACACATTTTGTTACAGAATTATACGTTGAAACAATTAAATTCATGTCCCCAAAAAATAAAAA
CAATGAAACTCCCTCTGATAATCAATTTGAAAACAACACTTATCAACCTGATGATTTAGAAATAATTCATATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
74.046 |
100 |
0.74 |
| ssb | Staphylococcus aureus MW2 |
73.282 |
100 |
0.733 |