Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   ACFDA7_RS01350 Genome accession   NZ_CP170247
Coordinates   317047..317943 (+) Length   298 a.a.
NCBI ID   WP_002458293.1    Uniprot ID   -
Organism   Staphylococcus epidermidis strain Q10     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 312047..322943
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFDA7_RS01330 (ACFDA7_01330) - 312733..314277 (+) 1545 WP_070853632.1 NAD(P)H-binding protein -
  ACFDA7_RS01335 (ACFDA7_01335) - 314400..315869 (-) 1470 WP_070853631.1 alkaline phosphatase -
  ACFDA7_RS01340 (ACFDA7_01340) - 316166..316345 (+) 180 WP_070853630.1 hypothetical protein -
  ACFDA7_RS01345 (ACFDA7_01345) braR 316376..317041 (+) 666 WP_070853629.1 response regulator transcription factor Regulator
  ACFDA7_RS01350 (ACFDA7_01350) braS 317047..317943 (+) 897 WP_002458293.1 HAMP domain-containing sensor histidine kinase Regulator
  ACFDA7_RS01355 (ACFDA7_01355) - 318054..318803 (+) 750 WP_381412549.1 ABC transporter ATP-binding protein -
  ACFDA7_RS01360 (ACFDA7_01360) - 318805..320817 (+) 2013 WP_002495980.1 FtsX-like permease family protein -
  ACFDA7_RS01365 (ACFDA7_01365) - 320921..321511 (+) 591 WP_020363892.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 298 a.a.        Molecular weight: 34930.56 Da        Isoelectric Point: 6.7015

>NTDB_id=1055923 ACFDA7_RS01350 WP_002458293.1 317047..317943(+) (braS) [Staphylococcus epidermidis strain Q10]
MKFAYIQSIRNEISIILIILLFFALIFYVFSLPFDAYVLAISIILLLMCVRWWIKYLSFKKNEHLKDKVAYLEYELAHVK
NQQIEYRNDVESYFLTWVHQIKTPITASQLLLERNEENVVNRVRQEIVHIDNYTSLALSYLKLLNEESDMTITKVTVDDL
IRPLILKYRIQFIEQKTQIHYEKSEDIILTDTQWASIMIEQLLNNALKYAKGKDIWIDFDVANQTLQIKDNGIGISKADI
PKIFDKGYSGFNGRLNEQSTGIGLFIVQHIANHLNIQVTVQSELNQGTVFFIHFTKEK

Nucleotide


Download         Length: 897 bp        

>NTDB_id=1055923 ACFDA7_RS01350 WP_002458293.1 317047..317943(+) (braS) [Staphylococcus epidermidis strain Q10]
ATGAAGTTTGCATATATTCAATCGATTCGTAATGAGATTTCAATTATTTTAATAATTCTATTATTTTTTGCACTTATATT
TTATGTATTTTCTTTACCATTTGATGCATACGTACTAGCAATCAGTATCATATTACTATTGATGTGTGTACGTTGGTGGA
TAAAGTATTTAAGTTTTAAAAAGAACGAACATCTTAAAGATAAAGTGGCATATTTAGAATATGAGTTAGCACATGTTAAG
AATCAGCAAATTGAATATCGTAATGATGTTGAAAGTTATTTTTTAACATGGGTACATCAAATTAAAACACCTATCACTGC
CTCACAATTACTTTTGGAGAGAAACGAGGAGAATGTAGTTAATCGTGTTAGACAAGAAATTGTGCACATTGATAATTATA
CAAGCCTCGCATTAAGTTATTTAAAATTATTAAATGAAGAGTCAGATATGACAATTACCAAAGTGACAGTTGATGATTTG
ATTCGGCCGTTGATTTTAAAATATAGAATTCAGTTTATTGAACAAAAGACGCAAATCCATTATGAAAAAAGTGAGGACAT
CATTTTAACCGATACACAATGGGCTTCTATAATGATAGAGCAACTTTTAAATAATGCTTTAAAATATGCTAAAGGTAAAG
ATATATGGATAGATTTTGATGTTGCCAATCAAACTCTACAGATTAAAGATAATGGTATTGGGATTAGTAAAGCAGATATT
CCTAAAATTTTTGATAAAGGATACTCAGGATTTAACGGTAGATTGAATGAACAATCAACAGGTATAGGTTTATTTATAGT
GCAACACATTGCAAATCATTTAAATATACAAGTAACTGTACAATCAGAGTTGAATCAGGGGACAGTATTTTTTATACATT
TTACTAAAGAAAAATAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(197-296)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

60.339

98.993

0.597

Multiple sequence alignment