Detailed information NTG1055880

Bioinformatically predicted

Overview

• Name: comK/comK1
• Type: Regulator
• Locus tag: ACFDA9_RS08570
• Genome accession: NZ_CP170245
• Coordinates: 1823761..1824336 (-)
• Length: 191 a.a.
• NCBI ID: WP_001829272.1
• Uniprot ID: -
• Organism: Staphylococcus epidermidis strain Q17
• Function: promote expression of competence genes (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IScluster/Tn	1821851..1823168	1823761..1824336	flank	593

Gene organization within MGE regions

Location: 1821851..1824336

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACFDA9_RS08555 (ACFDA9_08550)	-	1821851..1823168 (-)	1318	Protein_1652	ISL3 family transposase	-
ACFDA9_RS08570 (ACFDA9_08565)	comK/comK1	1823761..1824336 (-)	576	WP_001829272.1	competence protein ComK	Regulator

Sequence

Protein

• Length: 191 a.a.
• Molecular weight: 22782.87 Da
• Isoelectric Point: 9.2887

>NTDB_id=1055880 ACFDA9_RS08570 WP_001829272.1 1823761..1824336(-) (comK/comK1) [Staphylococcus epidermidis strain Q17]
MTHLPETIYVIRKGDMVIRPKYDEYQQTNGTEIIRFDQTRKESPFKVQRIIERSCKFYGNNYISKKAETNRITGISSKPP
ILLTPLFPTYFFPTHSDRQEENIWINMHYIENVKELKNRKSKIIFANGDSLTLNVSFHSLWHQYTNAIIYYYMVDKQSRM
KSNNPEQPIDYNQSSLNIFEALSRYSLFEEN

Nucleotide

• Length: 576 bp

>NTDB_id=1055880 ACFDA9_RS08570 WP_001829272.1 1823761..1824336(-) (comK/comK1) [Staphylococcus epidermidis strain Q17]
ATGACACATTTACCCGAAACGATTTATGTTATACGAAAAGGTGATATGGTAATACGACCTAAATATGATGAATATCAGCA
GACAAATGGTACTGAGATTATCAGATTTGATCAAACCCGCAAAGAAAGTCCATTTAAAGTACAGAGAATTATCGAAAGAT
CATGTAAGTTTTATGGCAATAATTATATTAGTAAAAAAGCAGAAACGAATCGTATTACTGGAATTTCTAGTAAACCACCT
ATTTTACTTACACCTCTTTTTCCTACTTACTTTTTTCCAACTCACTCGGACCGTCAAGAAGAAAATATATGGATTAATAT
GCATTATATTGAAAATGTTAAAGAACTTAAAAATCGTAAGAGTAAAATAATTTTTGCGAATGGTGATTCTTTAACACTCA
ATGTATCATTTCATAGTTTGTGGCATCAATACACCAATGCAATCATCTATTATTACATGGTAGATAAGCAATCACGAATG
AAATCTAACAACCCTGAACAACCCATTGACTATAATCAGTCCTCTTTAAATATTTTCGAGGCGCTTTCACGCTACTCTCT
TTTTGAAGAAAATTAG

Domains

Predicted by InterproScan.

• ComK protein (ComK) (7-158)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comK/comK1	Staphylococcus aureus MW2	76.757	96.859	0.743
comK/comK1	Staphylococcus aureus N315	76.757	96.859	0.743