Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   ACFDHS_RS01810 Genome accession   NZ_CP170235
Coordinates   369506..370171 (+) Length   221 a.a.
NCBI ID   WP_119635080.1    Uniprot ID   A0A418JLF9
Organism   Staphylococcus hyicus strain SC362     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 364506..375171
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFDHS_RS01785 (ACFDHS_01785) - 365008..365676 (+) 669 WP_119635076.1 response regulator transcription factor -
  ACFDHS_RS01790 (ACFDHS_01790) - 365759..366673 (+) 915 WP_380572642.1 ABC transporter ATP-binding protein -
  ACFDHS_RS01795 (ACFDHS_01795) - 366666..367418 (+) 753 WP_167696245.1 hypothetical protein -
  ACFDHS_RS01800 (ACFDHS_01800) - 367435..368352 (+) 918 WP_380572644.1 histidine kinase dimerization/phospho-acceptor domain-containing protein -
  ACFDHS_RS01805 (ACFDHS_01805) - 368938..369375 (-) 438 WP_209260594.1 glyoxalase/bleomycin resistance/extradiol dioxygenase family protein -
  ACFDHS_RS01810 (ACFDHS_01810) braR 369506..370171 (+) 666 WP_119635080.1 response regulator transcription factor Regulator
  ACFDHS_RS01815 (ACFDHS_01815) braS 370180..371091 (+) 912 WP_107642911.1 sensor histidine kinase Regulator
  ACFDHS_RS01820 (ACFDHS_01820) - 371182..371931 (+) 750 WP_039643665.1 ABC transporter ATP-binding protein -
  ACFDHS_RS01825 (ACFDHS_01825) - 371933..373894 (+) 1962 WP_305850466.1 ABC transporter permease -
  ACFDHS_RS01830 (ACFDHS_01830) - 374131..374757 (-) 627 WP_305850465.1 FMN-dependent NADH-azoreductase -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25848.04 Da        Isoelectric Point: 6.6922

>NTDB_id=1055734 ACFDHS_RS01810 WP_119635080.1 369506..370171(+) (braR) [Staphylococcus hyicus strain SC362]
MKIMIVEDDFTIAESLVKELQKWNHEAVNVQDYYHITEKFQTLQPHLVLLDINLPHLNGFHWCQEIRQKSQVPIIFISSA
SDNMNQMMAIQMGADDFIEKPFNLKLTIMKIQALLRRSYDFKVEQSQLHVKGCALVVDKALLIYQDQTLSLTLTELQILQ
QLFINEGHFVNRNTLIEHCWQSENFIDDNTLAVNMSRIRKKLKELGLVDFIQTKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=1055734 ACFDHS_RS01810 WP_119635080.1 369506..370171(+) (braR) [Staphylococcus hyicus strain SC362]
ATGAAGATTATGATTGTTGAGGATGATTTTACAATTGCAGAAAGTTTAGTCAAAGAACTTCAAAAATGGAATCATGAAGC
GGTAAATGTGCAAGATTATTATCATATAACTGAAAAATTCCAAACGCTTCAACCTCACCTCGTTCTTTTAGATATCAACC
TTCCACATCTTAATGGCTTTCATTGGTGTCAGGAAATACGGCAAAAATCTCAAGTACCTATTATATTTATTAGTTCGGCT
TCGGATAATATGAATCAAATGATGGCCATCCAAATGGGGGCTGATGACTTTATAGAAAAGCCGTTTAATTTAAAGTTAAC
AATTATGAAAATTCAAGCGTTATTGAGGCGATCTTATGACTTTAAAGTGGAACAATCTCAGTTACACGTAAAAGGATGTG
CGTTAGTTGTTGATAAAGCTTTATTGATATATCAAGATCAAACGCTGTCGCTAACGCTAACAGAGTTACAAATTTTACAA
CAATTATTTATAAATGAAGGACATTTTGTGAATCGTAATACATTAATTGAGCACTGTTGGCAATCTGAAAATTTCATTGA
TGACAATACGTTAGCAGTAAATATGTCTCGTATACGTAAGAAGTTAAAAGAACTAGGTTTAGTGGATTTTATACAAACGA
AAAAGAATGTAGGATACAAAGTATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-105)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A418JLF9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

67.421

100

0.674

Multiple sequence alignment