Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   ACFDHY_RS11005 Genome accession   NZ_CP170216
Coordinates   2187752..2188417 (-) Length   221 a.a.
NCBI ID   WP_119635080.1    Uniprot ID   A0A418JLF9
Organism   Staphylococcus hyicus strain SC393     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2182752..2193417
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFDHY_RS10985 (ACFDHY_10985) - 2183167..2183793 (+) 627 WP_305850465.1 FMN-dependent NADH-azoreductase -
  ACFDHY_RS10990 (ACFDHY_10990) - 2184029..2185990 (-) 1962 WP_381419730.1 ABC transporter permease -
  ACFDHY_RS10995 (ACFDHY_10995) - 2185992..2186741 (-) 750 WP_039643665.1 ABC transporter ATP-binding protein -
  ACFDHY_RS11000 (ACFDHY_11000) braS 2186832..2187743 (-) 912 WP_381419732.1 sensor histidine kinase Regulator
  ACFDHY_RS11005 (ACFDHY_11005) braR 2187752..2188417 (-) 666 WP_119635080.1 response regulator transcription factor Regulator
  ACFDHY_RS11010 (ACFDHY_11010) - 2188548..2188985 (+) 438 WP_209260594.1 glyoxalase/bleomycin resistance/extradiol dioxygenase family protein -
  ACFDHY_RS11015 (ACFDHY_11015) - 2189571..2190488 (-) 918 WP_380572644.1 histidine kinase dimerization/phospho-acceptor domain-containing protein -
  ACFDHY_RS11020 (ACFDHY_11020) - 2190505..2191257 (-) 753 WP_381419735.1 hypothetical protein -
  ACFDHY_RS11025 (ACFDHY_11025) - 2191250..2192164 (-) 915 WP_257071197.1 ABC transporter ATP-binding protein -
  ACFDHY_RS11030 (ACFDHY_11030) - 2192247..2192915 (-) 669 WP_119635076.1 response regulator transcription factor -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25848.04 Da        Isoelectric Point: 6.6922

>NTDB_id=1055569 ACFDHY_RS11005 WP_119635080.1 2187752..2188417(-) (braR) [Staphylococcus hyicus strain SC393]
MKIMIVEDDFTIAESLVKELQKWNHEAVNVQDYYHITEKFQTLQPHLVLLDINLPHLNGFHWCQEIRQKSQVPIIFISSA
SDNMNQMMAIQMGADDFIEKPFNLKLTIMKIQALLRRSYDFKVEQSQLHVKGCALVVDKALLIYQDQTLSLTLTELQILQ
QLFINEGHFVNRNTLIEHCWQSENFIDDNTLAVNMSRIRKKLKELGLVDFIQTKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=1055569 ACFDHY_RS11005 WP_119635080.1 2187752..2188417(-) (braR) [Staphylococcus hyicus strain SC393]
ATGAAGATTATGATTGTTGAGGATGATTTTACAATTGCAGAAAGTTTAGTCAAAGAACTTCAAAAATGGAATCATGAAGC
GGTAAATGTGCAAGATTATTATCATATAACTGAAAAATTCCAAACGCTTCAACCTCACCTCGTTCTTTTAGATATCAACC
TTCCACATCTTAATGGCTTTCATTGGTGTCAGGAAATACGGCAAAAATCTCAAGTACCTATTATATTTATTAGTTCGGCT
TCGGATAATATGAATCAAATGATGGCCATCCAAATGGGGGCTGATGACTTTATAGAAAAGCCGTTTAATTTAAAGTTAAC
AATTATGAAAATTCAAGCGTTATTGAGGCGATCTTATGACTTTAAAGTGGAACAATCTCAGTTACACGTAAAAGGATGTG
CGTTAGTTGTTGATAAAGCTTTATTGATATATCAAGATCAAACGCTGTCGCTAACGCTAACAGAGTTACAAATTTTACAA
CAATTATTTATAAATGAAGGACATTTTGTGAATCGTAATACATTAATTGAGCACTGTTGGCAATCTGAAAATTTCATTGA
TGACAATACGTTAGCAGTAAATATGTCTCGTATACGTAAGAAGTTAAAAGAACTAGGTTTAGTGGATTTTATACAAACGA
AAAAGAATGTAGGATACAAAGTATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-105)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A418JLF9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

67.421

100

0.674

Multiple sequence alignment