Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   ACFDHY_RS11000 Genome accession   NZ_CP170216
Coordinates   2186832..2187743 (-) Length   303 a.a.
NCBI ID   WP_381419732.1    Uniprot ID   -
Organism   Staphylococcus hyicus strain SC393     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2181832..2192743
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFDHY_RS10980 (ACFDHY_10980) spn 2182615..2182935 (+) 321 WP_039643670.1 SPIN family peroxidase inhibitor -
  ACFDHY_RS10985 (ACFDHY_10985) - 2183167..2183793 (+) 627 WP_305850465.1 FMN-dependent NADH-azoreductase -
  ACFDHY_RS10990 (ACFDHY_10990) - 2184029..2185990 (-) 1962 WP_381419730.1 ABC transporter permease -
  ACFDHY_RS10995 (ACFDHY_10995) - 2185992..2186741 (-) 750 WP_039643665.1 ABC transporter ATP-binding protein -
  ACFDHY_RS11000 (ACFDHY_11000) braS 2186832..2187743 (-) 912 WP_381419732.1 sensor histidine kinase Regulator
  ACFDHY_RS11005 (ACFDHY_11005) braR 2187752..2188417 (-) 666 WP_119635080.1 response regulator transcription factor Regulator
  ACFDHY_RS11010 (ACFDHY_11010) - 2188548..2188985 (+) 438 WP_209260594.1 glyoxalase/bleomycin resistance/extradiol dioxygenase family protein -
  ACFDHY_RS11015 (ACFDHY_11015) - 2189571..2190488 (-) 918 WP_380572644.1 histidine kinase dimerization/phospho-acceptor domain-containing protein -
  ACFDHY_RS11020 (ACFDHY_11020) - 2190505..2191257 (-) 753 WP_381419735.1 hypothetical protein -
  ACFDHY_RS11025 (ACFDHY_11025) - 2191250..2192164 (-) 915 WP_257071197.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 303 a.a.        Molecular weight: 35455.31 Da        Isoelectric Point: 7.6622

>NTDB_id=1055568 ACFDHY_RS11000 WP_381419732.1 2186832..2187743(-) (braS) [Staphylococcus hyicus strain SC393]
MSVRFYNHILSDVCIYVLMLMLFLFISLIYDFETEAYILTLSVSLFVFSLYIIVKWAYFKKQETLKQTNERLASELQHVK
MMHRDYQRDLEHYFLTWVHQIKTPITASKLLLERNEAGMVNRVRQEITEIENYTNLALNYLKLLSHETDMVVQKVVLDDI
VKPLIQRYALHFIEHRTRIHTEHLHCTVTTDAQWTKIMIEQILNNALKYAKGGDIWIEFDAHKQQLTIKDNGMGISKADL
PKIFEKGYSGTNGRLNDKSSGIGLFIVKEISEKLQHPITVQSELGVLTQFTIQFPKTSHLTIM

Nucleotide


Download         Length: 912 bp        

>NTDB_id=1055568 ACFDHY_RS11000 WP_381419732.1 2186832..2187743(-) (braS) [Staphylococcus hyicus strain SC393]
ATGTCTGTGCGCTTTTATAACCATATTTTAAGTGATGTTTGTATTTATGTACTCATGTTAATGTTGTTTTTATTTATATC
ATTAATCTATGACTTCGAAACGGAAGCCTATATTTTAACGTTATCCGTCTCACTCTTTGTGTTTAGTTTGTATATCATAG
TGAAGTGGGCCTATTTTAAAAAACAAGAAACATTAAAACAAACTAATGAGCGTTTGGCATCTGAATTGCAACACGTAAAA
ATGATGCATCGTGACTATCAACGAGATTTGGAACATTACTTTTTAACTTGGGTGCATCAAATTAAAACACCCATAACTGC
ATCCAAACTGTTGTTAGAGCGTAATGAAGCGGGGATGGTAAATCGCGTGCGTCAAGAAATTACAGAAATTGAGAATTATA
CGAATTTGGCGTTGAATTATTTAAAACTATTAAGTCATGAAACCGATATGGTTGTTCAAAAAGTCGTACTTGATGACATC
GTGAAACCGCTCATTCAACGTTATGCGTTACATTTTATTGAACATCGCACACGCATTCATACTGAACATTTACATTGTAC
GGTCACTACAGATGCACAATGGACTAAAATTATGATTGAACAAATTTTAAACAATGCTCTGAAATATGCGAAAGGTGGAG
ACATCTGGATTGAGTTTGATGCACACAAACAACAACTCACCATTAAAGATAATGGTATGGGGATTAGTAAAGCAGATTTA
CCCAAAATATTTGAAAAAGGATATTCTGGGACGAACGGGCGCCTAAATGACAAATCTAGCGGGATAGGATTGTTTATCGT
GAAAGAAATATCAGAGAAACTTCAGCATCCGATTACCGTTCAATCAGAATTAGGCGTTTTAACACAATTTACGATTCAGT
TCCCTAAAACGTCTCATCTTACAATTATGTAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(195-297)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

50.859

96.04

0.488

Multiple sequence alignment