Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ACFDAU_RS14300 Genome accession   NZ_CP170197
Coordinates   2896869..2897234 (+) Length   121 a.a.
NCBI ID   WP_124703269.1    Uniprot ID   -
Organism   Sulfuriferula sp. GW1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2891869..2902234
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFDAU_RS14265 (ACFDAU_14265) - 2891918..2892217 (-) 300 WP_413437567.1 chaperone modulator CbpM -
  ACFDAU_RS14270 (ACFDAU_14270) - 2892223..2893152 (-) 930 WP_413437568.1 DnaJ C-terminal domain-containing protein -
  ACFDAU_RS14275 (ACFDAU_14275) grxD 2893354..2893659 (+) 306 WP_413437569.1 Grx4 family monothiol glutaredoxin -
  ACFDAU_RS14280 (ACFDAU_14280) hemL 2893718..2895004 (-) 1287 WP_413439553.1 glutamate-1-semialdehyde 2,1-aminomutase -
  ACFDAU_RS14285 (ACFDAU_14285) thiE 2895007..2895633 (-) 627 WP_413437570.1 thiamine phosphate synthase -
  ACFDAU_RS14290 (ACFDAU_14290) thiD 2895630..2896454 (-) 825 WP_413437571.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  ACFDAU_RS14295 (ACFDAU_14295) - 2896531..2896707 (+) 177 WP_124703096.1 rubredoxin -
  ACFDAU_RS14300 (ACFDAU_14300) pilG 2896869..2897234 (+) 366 WP_124703269.1 response regulator Regulator
  ACFDAU_RS14305 (ACFDAU_14305) - 2897257..2897619 (+) 363 WP_413437572.1 response regulator -
  ACFDAU_RS14310 (ACFDAU_14310) - 2897653..2898165 (+) 513 WP_413437573.1 chemotaxis protein CheW -
  ACFDAU_RS14315 (ACFDAU_14315) - 2898224..2900362 (+) 2139 WP_413437574.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 121 a.a.        Molecular weight: 13453.55 Da        Isoelectric Point: 7.3223

>NTDB_id=1055512 ACFDAU_RS14300 WP_124703269.1 2896869..2897234(+) (pilG) [Sulfuriferula sp. GW1]
MVIDDSNTIRRSAEIFLNQAGCQVILAEDGFDALAKITEHLPDVVFVDIMMPRLDGYQTCSLIKKNAHFKATPVVMLSSK
DGLFDKARGRMVGSNEYLTKPFTKDTLLTAVQRHTTQHLAA

Nucleotide


Download         Length: 366 bp        

>NTDB_id=1055512 ACFDAU_RS14300 WP_124703269.1 2896869..2897234(+) (pilG) [Sulfuriferula sp. GW1]
ATGGTGATTGATGACAGCAACACAATCCGCCGTAGCGCAGAGATTTTTCTCAATCAGGCCGGCTGTCAGGTCATTCTTGC
CGAAGATGGATTTGACGCGCTGGCAAAAATCACCGAGCACCTGCCGGATGTTGTTTTTGTAGACATCATGATGCCGCGCC
TGGATGGCTACCAGACCTGCTCGCTGATCAAGAAGAATGCCCATTTCAAGGCCACGCCGGTAGTGATGCTATCAAGCAAG
GATGGCCTGTTCGACAAGGCGCGCGGGCGCATGGTCGGTTCCAATGAATACCTGACCAAACCATTTACCAAAGACACCCT
GTTAACCGCAGTACAACGCCACACCACCCAGCATTTAGCTGCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(1-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

67.241

95.868

0.645
  vicR Streptococcus mutans UA159

38.596

94.215

0.364

Multiple sequence alignment