Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | R8567_RS03630 | Genome accession | NZ_AP028407 |
| Coordinates | 709989..710294 (-) | Length | 101 a.a. |
| NCBI ID | WP_002777852.1 | Uniprot ID | A0A3Z9CUC7 |
| Organism | Campylobacter coli strain IDH-11847 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 704989..715294
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8567_RS03595 (I11847_07030) | - | 705404..706165 (+) | 762 | WP_025443303.1 | ATP-binding protein | - |
| R8567_RS03600 (I11847_07040) | - | 706162..706845 (+) | 684 | WP_317646776.1 | 3-methyladenine DNA glycosylase | - |
| R8567_RS03605 (I11847_07050) | thiD | 706845..707657 (+) | 813 | WP_317646778.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| R8567_RS03610 (I11847_07060) | thiE | 707647..708279 (+) | 633 | WP_002823547.1 | thiamine phosphate synthase | - |
| R8567_RS03615 (I11847_07070) | - | 708257..708886 (+) | 630 | WP_002780243.1 | uroporphyrinogen-III synthase | - |
| R8567_RS03620 (I11847_07080) | - | 708879..709331 (-) | 453 | WP_002777117.1 | hypothetical protein | - |
| R8567_RS03625 (I11847_07090) | - | 709328..709996 (-) | 669 | WP_002780245.1 | hypothetical protein | - |
| R8567_RS03630 (I11847_07100) | ctsT | 709989..710294 (-) | 306 | WP_002777852.1 | hypothetical protein | Machinery gene |
| R8567_RS03635 (I11847_07110) | proC | 710291..711028 (-) | 738 | WP_002780246.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| R8567_RS03640 (I11847_07120) | fliW | 711028..711417 (-) | 390 | WP_002777093.1 | flagellar assembly protein FliW | - |
| R8567_RS03645 (I11847_07130) | - | 711581..712228 (+) | 648 | WP_002777091.1 | outer membrane protein assembly factor BamD | - |
| R8567_RS03650 (I11847_07140) | lon | 712244..714619 (+) | 2376 | WP_002783351.1 | endopeptidase La | - |
| R8567_RS03655 (I11847_07150) | rpsR | 714675..714935 (-) | 261 | WP_002777087.1 | 30S ribosomal protein S18 | - |
Sequence
Protein
Download Length: 101 a.a. Molecular weight: 12396.25 Da Isoelectric Point: 6.0617
>NTDB_id=105551 R8567_RS03630 WP_002777852.1 709989..710294(-) (ctsT) [Campylobacter coli strain IDH-11847]
MKVAFSLLELILCIIILGLIFTSISKLFYQLNDNHDYLNYFERLYTLQDKLYTDPHQRDIKLHIQNLKTFDFKENFVNDN
IFQFKKLHIQNQDYSLYFYDE
MKVAFSLLELILCIIILGLIFTSISKLFYQLNDNHDYLNYFERLYTLQDKLYTDPHQRDIKLHIQNLKTFDFKENFVNDN
IFQFKKLHIQNQDYSLYFYDE
Nucleotide
Download Length: 306 bp
>NTDB_id=105551 R8567_RS03630 WP_002777852.1 709989..710294(-) (ctsT) [Campylobacter coli strain IDH-11847]
ATGAAAGTTGCATTCTCGCTTTTAGAATTAATTCTTTGTATAATTATCCTAGGATTAATTTTTACAAGTATTTCTAAATT
ATTTTATCAGCTAAATGACAATCATGATTATTTAAATTATTTTGAAAGATTATACACACTGCAAGATAAACTTTATACCG
ATCCTCATCAAAGAGATATAAAACTTCATATACAGAATTTAAAAACTTTTGATTTTAAAGAAAACTTTGTAAATGATAAT
ATCTTTCAATTTAAAAAATTACATATTCAAAATCAAGATTACTCCCTATATTTTTACGATGAATAA
ATGAAAGTTGCATTCTCGCTTTTAGAATTAATTCTTTGTATAATTATCCTAGGATTAATTTTTACAAGTATTTCTAAATT
ATTTTATCAGCTAAATGACAATCATGATTATTTAAATTATTTTGAAAGATTATACACACTGCAAGATAAACTTTATACCG
ATCCTCATCAAAGAGATATAAAACTTCATATACAGAATTTAAAAACTTTTGATTTTAAAGAAAACTTTGTAAATGATAAT
ATCTTTCAATTTAAAAAATTACATATTCAAAATCAAGATTACTCCCTATATTTTTACGATGAATAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
50 |
97.03 |
0.485 |