Detailed information
Bioinformatically predicted
Overview
| Name | ctsX | Type | Machinery gene |
| Locus tag | R8608_RS08045 | Genome accession | NZ_AP028398 |
| Coordinates | 1551748..1552335 (-) | Length | 195 a.a. |
| NCBI ID | WP_002851370.1 | Uniprot ID | A0AB36G4D4 |
| Organism | Campylobacter jejuni strain BCH-11511 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1546748..1557335
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8608_RS08025 (B11511_16090) | - | 1547496..1548260 (+) | 765 | WP_002851318.1 | TIGR02757 family protein | - |
| R8608_RS08030 (B11511_16100) | - | 1548264..1549034 (+) | 771 | WP_002873601.1 | TSUP family transporter | - |
| R8608_RS08035 (B11511_16110) | ctsF | 1549021..1550202 (-) | 1182 | WP_317647966.1 | type II secretion system F family protein | Machinery gene |
| R8608_RS08040 (B11511_16120) | ctsE | 1550199..1551758 (-) | 1560 | WP_043011746.1 | GspE/PulE family protein | Machinery gene |
| R8608_RS08045 (B11511_16130) | ctsX | 1551748..1552335 (-) | 588 | WP_002851370.1 | membrane protein | Machinery gene |
| R8608_RS08050 (B11511_16140) | ctsP | 1552339..1552947 (-) | 609 | WP_002851464.1 | ATP-binding protein | Machinery gene |
| R8608_RS08055 (B11511_16150) | ctsD | 1552940..1554352 (-) | 1413 | WP_002855316.1 | pilus (MSHA type) biogenesis protein MshL | Machinery gene |
| R8608_RS08060 (B11511_16160) | ctsR | 1554330..1554641 (-) | 312 | WP_002855438.1 | hypothetical protein | Machinery gene |
Sequence
Protein
Download Length: 195 a.a. Molecular weight: 23359.43 Da Isoelectric Point: 9.8409
>NTDB_id=105425 R8608_RS08045 WP_002851370.1 1551748..1552335(-) (ctsX) [Campylobacter jejuni strain BCH-11511]
MQERIKELELRYKYFLLKKYLKYLLLIILISVIAFCFFVLMQKYNKQKNIYLQAIEHKKHLEQKILQAQILQEKNKISRE
KLYKELEEVKAVQENTHISKIEIDSKILNISDLKKSFYQNPSYEKALNLAKKYFDIKAYQKTIFWALKANELDKQKQDSW
LIFAQAKRALGEEKEAQSALDAYINYYGLMELDGK
MQERIKELELRYKYFLLKKYLKYLLLIILISVIAFCFFVLMQKYNKQKNIYLQAIEHKKHLEQKILQAQILQEKNKISRE
KLYKELEEVKAVQENTHISKIEIDSKILNISDLKKSFYQNPSYEKALNLAKKYFDIKAYQKTIFWALKANELDKQKQDSW
LIFAQAKRALGEEKEAQSALDAYINYYGLMELDGK
Nucleotide
Download Length: 588 bp
>NTDB_id=105425 R8608_RS08045 WP_002851370.1 1551748..1552335(-) (ctsX) [Campylobacter jejuni strain BCH-11511]
ATGCAAGAAAGAATTAAAGAGCTTGAGCTTAGGTATAAATACTTTTTACTTAAAAAATATTTAAAATATTTATTATTAAT
TATTCTAATATCAGTAATAGCATTTTGTTTTTTTGTGCTAATGCAAAAATATAATAAGCAAAAAAATATTTATTTGCAGG
CTATTGAACATAAAAAGCACTTGGAGCAAAAGATTCTTCAAGCGCAAATTTTACAAGAAAAAAATAAGATTTCTAGGGAA
AAGTTATATAAAGAACTAGAAGAAGTTAAAGCGGTGCAGGAAAATACACATATTAGCAAGATAGAAATTGATTCTAAAAT
TTTAAATATTTCTGATTTAAAAAAATCTTTTTATCAAAATCCAAGCTATGAAAAGGCTTTAAATTTAGCTAAGAAGTATT
TTGATATTAAAGCTTATCAAAAGACAATATTTTGGGCTTTAAAAGCCAATGAACTTGACAAGCAAAAACAAGATTCTTGG
CTGATTTTTGCTCAGGCTAAAAGAGCTTTAGGCGAAGAAAAAGAAGCTCAAAGTGCTTTAGATGCTTATATAAATTATTA
TGGTTTAATGGAATTAGATGGAAAGTAG
ATGCAAGAAAGAATTAAAGAGCTTGAGCTTAGGTATAAATACTTTTTACTTAAAAAATATTTAAAATATTTATTATTAAT
TATTCTAATATCAGTAATAGCATTTTGTTTTTTTGTGCTAATGCAAAAATATAATAAGCAAAAAAATATTTATTTGCAGG
CTATTGAACATAAAAAGCACTTGGAGCAAAAGATTCTTCAAGCGCAAATTTTACAAGAAAAAAATAAGATTTCTAGGGAA
AAGTTATATAAAGAACTAGAAGAAGTTAAAGCGGTGCAGGAAAATACACATATTAGCAAGATAGAAATTGATTCTAAAAT
TTTAAATATTTCTGATTTAAAAAAATCTTTTTATCAAAATCCAAGCTATGAAAAGGCTTTAAATTTAGCTAAGAAGTATT
TTGATATTAAAGCTTATCAAAAGACAATATTTTGGGCTTTAAAAGCCAATGAACTTGACAAGCAAAAACAAGATTCTTGG
CTGATTTTTGCTCAGGCTAAAAGAGCTTTAGGCGAAGAAAAAGAAGCTCAAAGTGCTTTAGATGCTTATATAAATTATTA
TGGTTTAATGGAATTAGATGGAAAGTAG
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsX | Campylobacter jejuni subsp. jejuni 81-176 |
100 |
100 |
1 |