Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | BCV36_RS12215 | Genome accession | NZ_CP169997 |
| Coordinates | 2746545..2747063 (-) | Length | 172 a.a. |
| NCBI ID | WP_016787693.1 | Uniprot ID | A0AAN0LPQ8 |
| Organism | Vibrio cyclitrophicus strain 10N.286.55.C4 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2741545..2752063
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BCV36_RS12200 (BCV36_12200) | aroB | 2742986..2744074 (-) | 1089 | WP_010435273.1 | 3-dehydroquinate synthase | - |
| BCV36_RS12205 (BCV36_12205) | aroK | 2744099..2744617 (-) | 519 | WP_009848907.1 | shikimate kinase AroK | - |
| BCV36_RS12210 (BCV36_12210) | pilQ | 2744794..2746485 (-) | 1692 | WP_016787694.1 | type IV pilus secretin PilQ | Machinery gene |
| BCV36_RS12215 (BCV36_12215) | pilP | 2746545..2747063 (-) | 519 | WP_016787693.1 | pilus assembly protein PilP | Machinery gene |
| BCV36_RS12220 (BCV36_12220) | pilO | 2747050..2747661 (-) | 612 | WP_065100850.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| BCV36_RS12225 (BCV36_12225) | pilN | 2747654..2748268 (-) | 615 | WP_010435288.1 | PilN domain-containing protein | Machinery gene |
| BCV36_RS12230 (BCV36_12230) | pilM | 2748252..2749277 (-) | 1026 | WP_016787692.1 | type IV pilus assembly protein PilM | Machinery gene |
| BCV36_RS12235 (BCV36_12235) | - | 2749429..2751987 (+) | 2559 | WP_010435294.1 | penicillin-binding protein 1A | - |
Sequence
Protein
Download Length: 172 a.a. Molecular weight: 19191.31 Da Isoelectric Point: 10.3202
>NTDB_id=1054205 BCV36_RS12215 WP_016787693.1 2746545..2747063(-) (pilP) [Vibrio cyclitrophicus strain 10N.286.55.C4]
MKPSNALYSILLLLLLSGCKANEDSLEDFVVQVEAKARKEVEQLVPASEFAAATYQRRAFRPPFELPQEAIVQNQPLVKK
NCWQPSTRARNGKLEKYPLNQLRLKGVMGSDSSVFGLVQTPIGNVVNVKKGQFIGLNNGRVTKVTSQYVLINETLPDGLG
CWHKRNVRLALK
MKPSNALYSILLLLLLSGCKANEDSLEDFVVQVEAKARKEVEQLVPASEFAAATYQRRAFRPPFELPQEAIVQNQPLVKK
NCWQPSTRARNGKLEKYPLNQLRLKGVMGSDSSVFGLVQTPIGNVVNVKKGQFIGLNNGRVTKVTSQYVLINETLPDGLG
CWHKRNVRLALK
Nucleotide
Download Length: 519 bp
>NTDB_id=1054205 BCV36_RS12215 WP_016787693.1 2746545..2747063(-) (pilP) [Vibrio cyclitrophicus strain 10N.286.55.C4]
ATGAAACCCAGTAACGCGCTTTATTCGATCTTGTTATTACTTTTATTGTCGGGCTGCAAAGCAAATGAGGATTCGTTAGA
AGACTTTGTTGTGCAAGTTGAGGCCAAGGCGAGGAAAGAGGTGGAACAGCTTGTTCCTGCCTCTGAGTTTGCTGCTGCCA
CTTATCAACGCCGAGCTTTTCGTCCTCCTTTTGAACTTCCTCAGGAAGCTATTGTGCAGAATCAACCTCTGGTTAAAAAA
AACTGTTGGCAGCCCAGTACTCGTGCTCGTAATGGAAAATTAGAAAAGTACCCGCTAAATCAGTTGCGTTTAAAAGGTGT
AATGGGAAGTGACTCAAGTGTATTTGGCCTTGTGCAGACGCCTATAGGTAACGTTGTGAATGTTAAGAAAGGTCAGTTCA
TCGGCTTAAACAATGGTCGAGTTACCAAGGTAACAAGCCAGTACGTTCTGATTAATGAAACTCTTCCAGATGGCTTAGGT
TGTTGGCACAAGCGCAACGTTAGGCTGGCTCTGAAGTAA
ATGAAACCCAGTAACGCGCTTTATTCGATCTTGTTATTACTTTTATTGTCGGGCTGCAAAGCAAATGAGGATTCGTTAGA
AGACTTTGTTGTGCAAGTTGAGGCCAAGGCGAGGAAAGAGGTGGAACAGCTTGTTCCTGCCTCTGAGTTTGCTGCTGCCA
CTTATCAACGCCGAGCTTTTCGTCCTCCTTTTGAACTTCCTCAGGAAGCTATTGTGCAGAATCAACCTCTGGTTAAAAAA
AACTGTTGGCAGCCCAGTACTCGTGCTCGTAATGGAAAATTAGAAAAGTACCCGCTAAATCAGTTGCGTTTAAAAGGTGT
AATGGGAAGTGACTCAAGTGTATTTGGCCTTGTGCAGACGCCTATAGGTAACGTTGTGAATGTTAAGAAAGGTCAGTTCA
TCGGCTTAAACAATGGTCGAGTTACCAAGGTAACAAGCCAGTACGTTCTGATTAATGAAACTCTTCCAGATGGCTTAGGT
TGTTGGCACAAGCGCAACGTTAGGCTGGCTCTGAAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Vibrio cholerae strain A1552 |
63.19 |
94.767 |
0.599 |
| pilP | Vibrio campbellii strain DS40M4 |
55.689 |
97.093 |
0.541 |