Detailed information
Bioinformatically predicted
Overview
| Name | exbB | Type | Machinery gene |
| Locus tag | ACE4QZ_RS19085 | Genome accession | NZ_CP169881 |
| Coordinates | 4053134..4053769 (-) | Length | 211 a.a. |
| NCBI ID | WP_031322710.1 | Uniprot ID | A0A1X1A0J8 |
| Organism | Pseudomonas sp. DCA-1 | ||
| Function | ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 4048134..4058769
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACE4QZ_RS19055 | murB | 4049231..4050250 (-) | 1020 | WP_021784974.1 | UDP-N-acetylmuramate dehydrogenase | - |
| ACE4QZ_RS19060 | - | 4050247..4050711 (-) | 465 | WP_019752229.1 | low molecular weight protein-tyrosine-phosphatase | - |
| ACE4QZ_RS19065 | kdsB | 4050711..4051475 (-) | 765 | WP_021784973.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| ACE4QZ_RS19070 | - | 4051472..4051657 (-) | 186 | WP_003247142.1 | Trm112 family protein | - |
| ACE4QZ_RS19075 | lpxK | 4051702..4052703 (-) | 1002 | WP_021784972.1 | tetraacyldisaccharide 4'-kinase | - |
| ACE4QZ_RS19080 | - | 4052703..4053137 (-) | 435 | WP_021784971.1 | ExbD/TolR family protein | - |
| ACE4QZ_RS19085 | exbB | 4053134..4053769 (-) | 636 | WP_031322710.1 | MotA/TolQ/ExbB proton channel family protein | Machinery gene |
| ACE4QZ_RS19090 | - | 4054313..4055308 (-) | 996 | WP_410480109.1 | IS110 family transposase | - |
| ACE4QZ_RS19095 | comA | 4055985..4058198 (-) | 2214 | WP_331245272.1 | DNA internalization-related competence protein ComEC/Rec2 | Machinery gene |
Sequence
Protein
Download Length: 211 a.a. Molecular weight: 22857.14 Da Isoelectric Point: 7.3616
>NTDB_id=1054020 ACE4QZ_RS19085 WP_031322710.1 4053134..4053769(-) (exbB) [Pseudomonas sp. DCA-1]
MWELVKSGGWMMLPIILSSIAAMAIVVERLWTLRASRVTPPHLLGQVWIWIKDKQLTSDKLKALRADSPLGEILAAGLAN
SRHGREIMKECIEEAASRVIHELERYISTLGTIAAMAPLLGLLGTVLGMIDIFSAFMGSQMTANAAVLASGISKALVTTA
AGLMVGIPAVFFHRFLLRRIDELVIGMEQEAIKLVEVIQGDREVEVAGGKG
MWELVKSGGWMMLPIILSSIAAMAIVVERLWTLRASRVTPPHLLGQVWIWIKDKQLTSDKLKALRADSPLGEILAAGLAN
SRHGREIMKECIEEAASRVIHELERYISTLGTIAAMAPLLGLLGTVLGMIDIFSAFMGSQMTANAAVLASGISKALVTTA
AGLMVGIPAVFFHRFLLRRIDELVIGMEQEAIKLVEVIQGDREVEVAGGKG
Nucleotide
Download Length: 636 bp
>NTDB_id=1054020 ACE4QZ_RS19085 WP_031322710.1 4053134..4053769(-) (exbB) [Pseudomonas sp. DCA-1]
GTGTGGGAATTGGTCAAGTCCGGTGGTTGGATGATGCTGCCGATCATTCTGAGCTCCATCGCTGCCATGGCTATCGTCGT
CGAACGGCTGTGGACCTTGCGCGCCAGTCGCGTCACCCCGCCGCACCTGCTGGGCCAGGTGTGGATTTGGATCAAGGACA
AGCAACTGACCAGTGACAAGCTCAAGGCCCTGCGTGCCGATTCGCCACTGGGGGAAATCCTCGCGGCGGGCCTGGCCAAT
TCGCGTCACGGTCGGGAAATCATGAAAGAGTGCATCGAGGAGGCCGCCTCGCGCGTCATCCACGAACTGGAACGCTACAT
CAGTACCCTCGGCACCATCGCCGCCATGGCGCCTCTGCTGGGCCTGCTGGGCACCGTGCTGGGTATGATCGACATTTTCA
GCGCCTTCATGGGCTCGCAGATGACTGCCAACGCCGCCGTACTGGCCAGTGGTATCTCCAAGGCCCTGGTCACCACTGCG
GCTGGCCTGATGGTCGGTATCCCGGCGGTGTTCTTCCACCGCTTCCTGCTGCGTCGTATCGATGAACTGGTGATCGGCAT
GGAGCAGGAGGCGATCAAGCTGGTGGAAGTGATCCAGGGCGACCGTGAAGTGGAAGTGGCCGGAGGCAAGGGGTGA
GTGTGGGAATTGGTCAAGTCCGGTGGTTGGATGATGCTGCCGATCATTCTGAGCTCCATCGCTGCCATGGCTATCGTCGT
CGAACGGCTGTGGACCTTGCGCGCCAGTCGCGTCACCCCGCCGCACCTGCTGGGCCAGGTGTGGATTTGGATCAAGGACA
AGCAACTGACCAGTGACAAGCTCAAGGCCCTGCGTGCCGATTCGCCACTGGGGGAAATCCTCGCGGCGGGCCTGGCCAAT
TCGCGTCACGGTCGGGAAATCATGAAAGAGTGCATCGAGGAGGCCGCCTCGCGCGTCATCCACGAACTGGAACGCTACAT
CAGTACCCTCGGCACCATCGCCGCCATGGCGCCTCTGCTGGGCCTGCTGGGCACCGTGCTGGGTATGATCGACATTTTCA
GCGCCTTCATGGGCTCGCAGATGACTGCCAACGCCGCCGTACTGGCCAGTGGTATCTCCAAGGCCCTGGTCACCACTGCG
GCTGGCCTGATGGTCGGTATCCCGGCGGTGTTCTTCCACCGCTTCCTGCTGCGTCGTATCGATGAACTGGTGATCGGCAT
GGAGCAGGAGGCGATCAAGCTGGTGGAAGTGATCCAGGGCGACCGTGAAGTGGAAGTGGCCGGAGGCAAGGGGTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| exbB | Pseudomonas stutzeri DSM 10701 |
81.905 |
99.526 |
0.815 |