Detailed information NTG1054002

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: ACEZ45_RS17180
• Genome accession: NZ_CP169877
• Coordinates: 3447930..3449093 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain JF
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3442930..3454093

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACEZ45_RS17150 (ACEZ45_17145)	-	3443195..3443614 (-)	420	WP_069473598.1	TIGR03826 family flagellar region protein	-
ACEZ45_RS17155 (ACEZ45_17150)	comFC	3443688..3444377 (-)	690	WP_196616643.1	phosphoribosyltransferase family protein	Machinery gene
ACEZ45_RS17160 (ACEZ45_17155)	-	3444383..3444667 (-)	285	WP_057080260.1	late competence development ComFB family protein	-
ACEZ45_RS17165 (ACEZ45_17160)	comFA	3444725..3446110 (-)	1386	WP_069473599.1	DEAD/DEAH box helicase	Machinery gene
ACEZ45_RS17170 (ACEZ45_17165)	-	3446218..3447066 (-)	849	WP_043867471.1	DegV family protein	-
ACEZ45_RS17175 (ACEZ45_17170)	degU	3447164..3447853 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
ACEZ45_RS17180 (ACEZ45_17175)	degS	3447930..3449093 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
ACEZ45_RS17185 (ACEZ45_17180)	-	3449316..3449963 (+)	648	WP_043867472.1	YigZ family protein	-
ACEZ45_RS17190 (ACEZ45_17185)	-	3449968..3451182 (+)	1215	WP_043867473.1	LCP family protein	-
ACEZ45_RS17195 (ACEZ45_17190)	-	3451272..3452348 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
ACEZ45_RS17200 (ACEZ45_17195)	-	3452481..3453677 (-)	1197	WP_003151381.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=1054002 ACEZ45_RS17180 WP_003151385.1 3447930..3449093(-) (degS) [Bacillus amyloliquefaciens strain JF]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=1054002 ACEZ45_RS17180 WP_003151385.1 3447930..3449093(-) (degS) [Bacillus amyloliquefaciens strain JF]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGGGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GTACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948