Detailed information NTG1053833

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: ABUS28_RS16555
• Genome accession: NZ_CP169866
• Coordinates: 3443087..3444508 (+)
• Length: 473 a.a.
• NCBI ID: WP_261480849.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain Rp779
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 3438087..3449508

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABUS28_RS16535	thrC	3438341..3439480 (+)	1140	WP_000063593.1	threonine synthase	-
ABUS28_RS16540	pbpG	3439589..3440635 (-)	1047	WP_001984577.1	D-alanyl-D-alanine endopeptidase PBP7/8	-
ABUS28_RS16545	-	3440848..3441483 (+)	636	WP_000633799.1	response regulator	-
ABUS28_RS16550	pilS	3441494..3443062 (+)	1569	WP_001160342.1	PAS domain-containing sensor histidine kinase	Regulator
ABUS28_RS16555	pilR	3443087..3444508 (+)	1422	WP_261480849.1	sigma-54 dependent transcriptional regulator	Regulator
ABUS28_RS16560	-	3444512..3445696 (-)	1185	WP_000939103.1	S41 family peptidase	-
ABUS28_RS16565	gpmI	3445712..3447259 (-)	1548	WP_000128749.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
ABUS28_RS16570	lptG	3447385..3448455 (-)	1071	WP_000881086.1	LPS export ABC transporter permease LptG	-

Sequence

Protein

• Length: 473 a.a.
• Molecular weight: 52908.02 Da
• Isoelectric Point: 6.6688

>NTDB_id=1053833 ABUS28_RS16555 WP_261480849.1 3443087..3444508(+) (pilR) [Acinetobacter baumannii strain Rp779]
MAEQQPLVLLVDDEEDLCLLMQMTLARMGIKTHLAYRVEQAKQLFTQFHYDACLTDLNLPDGSGIDLVKHVSQNYTNTPI
AVLTAYGNMDIAIAALKAGAFDFVSKPVNQVHLDQLLQKALNRQKVEHDATENALENKLLIGRSLPIQQLRIAIKKIARS
QAPVFVTGESGTGKEVVANLVHRLSNRSEGPFIAINCGAIPTELMESELFGHKKGGFTGATQDKQGLILSAHGGSLFLDE
IAELPLSMQVKLLRAVQEKKIRPVGSDQEIDVDFRVISASHQDLDLLVRQGKFRQDLFFRIHVMDLILPPLRERGDDVLL
LANHFIQKICMEWETPPKQLTEAAETYLLQQHFPGNVRELRNMIERAITLSEDATIDISHLHPAPLRANISNPLASAAQS
IQTTVAASQAVKKLPSEGLERYLENIEKDILLNALNMTHWNRTLAAKKLGMTFRSLRYRLKKFGLDTETEQEV

Nucleotide

• Length: 1422 bp

>NTDB_id=1053833 ABUS28_RS16555 WP_261480849.1 3443087..3444508(+) (pilR) [Acinetobacter baumannii strain Rp779]
ATGGCAGAACAGCAACCACTGGTTTTGCTTGTAGACGATGAAGAAGATTTGTGCCTATTGATGCAAATGACACTTGCACG
AATGGGGATTAAAACACATCTTGCTTATCGGGTTGAACAGGCCAAACAACTCTTCACTCAGTTTCATTACGACGCATGTT
TAACCGACTTAAACCTACCCGATGGGAGCGGGATAGATTTAGTTAAACATGTCTCTCAAAATTACACTAATACTCCCATT
GCAGTTTTAACTGCCTACGGCAATATGGATATTGCAATTGCAGCATTAAAAGCAGGCGCTTTTGATTTTGTAAGCAAACC
GGTCAACCAAGTACATCTAGATCAATTATTACAAAAAGCCTTGAATCGGCAAAAAGTAGAGCATGATGCTACCGAGAATG
CGTTAGAAAATAAATTATTAATCGGCCGTTCTCTACCCATCCAGCAGCTACGTATTGCAATTAAAAAAATTGCGCGCTCA
CAAGCACCTGTATTTGTTACCGGTGAGTCTGGAACAGGTAAAGAAGTAGTTGCCAATTTGGTTCATCGGCTGAGTAACCG
TAGTGAAGGCCCTTTTATTGCAATTAACTGCGGTGCCATTCCAACCGAACTCATGGAAAGTGAGCTTTTTGGGCATAAAA
AAGGGGGCTTTACCGGAGCAACTCAAGATAAACAAGGCCTCATTTTATCGGCACACGGTGGCAGTTTATTTTTAGATGAA
ATTGCCGAATTACCTTTAAGTATGCAGGTCAAACTGCTCCGCGCAGTACAGGAAAAAAAGATCCGACCTGTCGGTTCAGA
TCAGGAAATCGATGTTGATTTCCGTGTGATTAGTGCAAGTCATCAAGACTTAGATTTATTAGTTCGACAGGGCAAATTCC
GTCAAGATTTATTCTTCCGTATTCATGTTATGGACCTCATATTGCCACCTCTACGTGAACGTGGCGACGATGTCCTTTTA
CTGGCCAATCACTTTATTCAGAAAATTTGTATGGAGTGGGAAACGCCACCTAAACAATTAACAGAAGCAGCCGAAACTTA
TCTGCTACAGCAACACTTTCCGGGTAATGTTCGCGAATTAAGAAATATGATTGAGCGCGCAATTACCTTAAGTGAAGATG
CCACCATAGATATATCTCATTTACATCCTGCTCCACTAAGAGCGAATATTTCTAATCCTCTTGCTTCGGCTGCTCAAAGC
ATACAAACCACTGTGGCGGCTTCTCAAGCCGTAAAAAAATTACCAAGTGAAGGTCTAGAACGTTATTTAGAAAATATTGA
AAAAGATATTTTACTCAATGCACTCAATATGACTCATTGGAATCGTACCTTAGCAGCTAAAAAATTAGGAATGACTTTCC
GCTCTTTACGCTATCGTCTGAAAAAATTTGGCTTAGATACGGAGACAGAACAGGAAGTATAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (8-117)

• Sigma-54 interaction domain (Sigma54_activat) (140-306)

• Bacterial regulatory protein, Fis family (HTH_8) (423-463)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	98.52	100	0.985
pilR	Pseudomonas aeruginosa PAK	50.763	97.04	0.493