Detailed information NTG1053788

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: ABUS39_RS17470
• Genome accession: NZ_CP169859
• Coordinates: 3626082..3627503 (+)
• Length: 473 a.a.
• NCBI ID: WP_000840557.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain Rp772
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 3621082..3632503

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABUS39_RS17450	thrC	3621339..3622478 (+)	1140	WP_000063593.1	threonine synthase	-
ABUS39_RS17455	pbpG	3622583..3623629 (-)	1047	WP_001984577.1	D-alanyl-D-alanine endopeptidase PBP7/8	-
ABUS39_RS17460	-	3623842..3624477 (+)	636	WP_000633799.1	response regulator	-
ABUS39_RS17465	pilS	3624488..3626056 (+)	1569	WP_001160347.1	PAS domain-containing sensor histidine kinase	Regulator
ABUS39_RS17470	pilR	3626082..3627503 (+)	1422	WP_000840557.1	sigma-54 dependent transcriptional regulator	Regulator
ABUS39_RS17475	-	3627507..3628691 (-)	1185	WP_000939107.1	S41 family peptidase	-
ABUS39_RS17480	gpmI	3628707..3630254 (-)	1548	WP_000128749.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
ABUS39_RS17485	lptG	3630381..3631451 (-)	1071	WP_000881094.1	LPS export ABC transporter permease LptG	-

Sequence

Protein

• Length: 473 a.a.
• Molecular weight: 52988.16 Da
• Isoelectric Point: 6.5058

>NTDB_id=1053788 ABUS39_RS17470 WP_000840557.1 3626082..3627503(+) (pilR) [Acinetobacter baumannii strain Rp772]
MAEQQPLVLLVDDEEDLCLLMQMTLARMGIKTHLAYRVEQAKQLFTQFHYDACLTDLNLPDGSGIDLVKHVSQNYTNTPI
AVLTAYGNMDIAIAALKAGAFDFVSKPVNQVHLDQLLQKALNRQKVESDFAESALENKLLIGCSLPIQQLRIAIKKIARS
QAPVFVTGESGTGKEVVANLVHRLSNRSEGPFIAINCGAIPTELMESELFGHKKGSFTGATQDKQGLILSAHGGSLFLDE
IAELPLSMQVKLLRAVQEKKIRPVGSDQEIDVDFRVISASHQDLDLLVRQGKFRQDLFFRIHVMDLILPPLRERGEDVLL
LANHFIQKICMEWETTPKQLTEAAETYLLQQHFPGNVRELRNMIERAITLSEDTTIDVSHLHPAPLRANISNPFASVAQS
IQTTVAAPQVVKKLPSEGLERYLENIEKDILLNALNMTHWNRTLAAKKLGMTFRSLRYRLKKFGLDTETEQEV

Nucleotide

• Length: 1422 bp

>NTDB_id=1053788 ABUS39_RS17470 WP_000840557.1 3626082..3627503(+) (pilR) [Acinetobacter baumannii strain Rp772]
ATGGCAGAACAGCAACCACTAGTTTTGCTTGTAGACGATGAAGAAGATTTGTGCCTTTTAATGCAAATGACACTTGCACG
AATGGGGATTAAAACACATCTTGCTTATCGGGTTGAACAGGCCAAACAACTCTTCACACAGTTTCATTACGATGCATGTT
TAACCGATCTAAACTTACCCGATGGGAGTGGGATAGATTTAGTTAAACATGTCTCTCAAAATTATACTAATACTCCCATT
GCAGTTTTAACTGCCTACGGCAATATGGATATTGCAATTGCAGCATTAAAAGCAGGCGCTTTTGATTTTGTAAGCAAACC
AGTCAACCAAGTACATCTAGATCAATTATTACAAAAAGCCTTGAATCGGCAAAAAGTAGAGTCTGATTTTGCCGAGAGTG
CTTTAGAAAACAAATTATTAATCGGTTGTTCTCTGCCTATTCAACAATTACGCATCGCAATTAAAAAAATTGCTCGCTCT
CAAGCACCGGTATTTGTTACCGGTGAGTCTGGAACAGGTAAAGAAGTAGTTGCTAACTTAGTTCATCGGCTGAGTAACCG
TAGTGAAGGCCCTTTTATTGCAATTAACTGCGGTGCCATTCCAACCGAACTCATGGAAAGTGAGCTTTTTGGGCATAAAA
AAGGGAGCTTTACCGGAGCAACTCAAGATAAACAAGGCCTCATTTTATCGGCACACGGTGGCAGTTTATTTTTAGATGAA
ATTGCCGAATTACCTTTAAGTATGCAGGTCAAACTGCTCCGCGCAGTACAGGAAAAAAAGATCCGGCCTGTCGGTTCAGA
TCAGGAAATCGATGTTGATTTCCGTGTGATTAGTGCAAGTCATCAAGACTTAGATTTATTAGTTCGACAGGGCAAATTCC
GTCAAGATTTATTCTTCCGTATTCACGTTATGGACCTCATATTGCCACCTCTACGTGAACGTGGCGAAGATGTCCTTTTA
CTGGCCAATCACTTTATTCAGAAAATTTGTATGGAGTGGGAAACGACACCTAAACAATTAACAGAAGCGGCCGAAACTTA
TCTGCTACAGCAACACTTTCCGGGTAATGTTCGTGAATTAAGAAATATGATTGAGCGCGCAATTACCTTAAGTGAAGATA
CCACTATAGATGTATCTCATTTACATCCTGCTCCACTAAGAGCAAATATTTCTAATCCTTTTGCTTCGGTTGCTCAAAGC
ATACAAACCACTGTGGCAGCTCCTCAAGTCGTAAAAAAATTACCAAGTGAAGGCTTAGAACGTTATTTAGAAAATATTGA
AAAAGATATTTTACTCAATGCACTCAATATGACTCATTGGAATCGTACCTTAGCAGCTAAAAAATTAGGAATGACTTTCC
GCTCTTTACGCTATCGTCTGAAAAAATTTGGCTTAGATACGGAGACAGAACAGGAAGTATAA

Domains

Predicted by InterproScan.

• Sigma-54 interaction domain (Sigma54_activat) (141-306)

• Response regulator receiver domain (Response_reg) (8-117)

• Bacterial regulatory protein, Fis family (HTH_8) (423-463)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	97.463	100	0.975
pilR	Pseudomonas aeruginosa PAK	50.545	97.04	0.49