Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | ABUS16_RS11390 | Genome accession | NZ_CP169833 |
| Coordinates | 2368555..2368935 (+) | Length | 126 a.a. |
| NCBI ID | WP_000836914.1 | Uniprot ID | A0A098SJS3 |
| Organism | Acinetobacter baumannii strain Rp376 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2363555..2373935
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABUS16_RS11360 | kdsB | 2364458..2365219 (+) | 762 | WP_000680692.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| ABUS16_RS11365 | - | 2365231..2366211 (+) | 981 | WP_001075416.1 | DNA polymerase III subunit delta' | - |
| ABUS16_RS11370 | - | 2366223..2366564 (+) | 342 | WP_001183027.1 | PilZ domain-containing protein | - |
| ABUS16_RS11375 | - | 2366582..2367355 (+) | 774 | WP_000497300.1 | TatD family hydrolase | - |
| ABUS16_RS11380 | - | 2367393..2368001 (+) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| ABUS16_RS11385 | - | 2368011..2368565 (+) | 555 | WP_000841373.1 | type II secretion system protein | - |
| ABUS16_RS11390 | xcpV | 2368555..2368935 (+) | 381 | WP_000836914.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| ABUS16_RS11395 | xcpW | 2368935..2369636 (+) | 702 | WP_000594579.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| ABUS16_RS11400 | gspK | 2369636..2370595 (+) | 960 | WP_072292244.1 | type II secretion system minor pseudopilin GspK | - |
| ABUS16_RS11405 | - | 2370825..2371421 (+) | 597 | WP_000908449.1 | 6-carboxytetrahydropterin synthase | - |
| ABUS16_RS11410 | ung | 2371472..2372185 (+) | 714 | WP_001177527.1 | uracil-DNA glycosylase | - |
| ABUS16_RS11415 | - | 2372182..2373306 (+) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| ABUS16_RS11420 | tadA | 2373313..2373816 (+) | 504 | WP_001997771.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 14074.34 Da Isoelectric Point: 10.0341
>NTDB_id=1053550 ABUS16_RS11390 WP_000836914.1 2368555..2368935(+) (xcpV) [Acinetobacter baumannii strain Rp376]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKRKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKRKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=1053550 ABUS16_RS11390 WP_000836914.1 2368555..2368935(+) (xcpV) [Acinetobacter baumannii strain Rp376]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCTGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACTCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTGGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATC
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGAG
AAAAGTACAAAATGGCATTACACATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCTGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACTCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTGGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATC
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGAG
AAAAGTACAAAATGGCATTACACATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
99.206 |
100 |
0.992 |