Detailed information NTG1053505

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: ABUS13_RS17215
• Genome accession: NZ_CP169832
• Coordinates: 3604432..3605853 (+)
• Length: 473 a.a.
• NCBI ID: WP_000840554.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain Lv648
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 3599432..3610853

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABUS13_RS17195	thrC	3599686..3600825 (+)	1140	WP_000063591.1	threonine synthase	-
ABUS13_RS17200	pbpG	3600935..3601981 (-)	1047	WP_001984577.1	D-alanyl-D-alanine endopeptidase PBP7/8	-
ABUS13_RS17205	-	3602194..3602829 (+)	636	WP_000633799.1	response regulator	-
ABUS13_RS17210	pilS	3602840..3604408 (+)	1569	WP_001160345.1	PAS domain-containing sensor histidine kinase	Regulator
ABUS13_RS17215	pilR	3604432..3605853 (+)	1422	WP_000840554.1	sigma-54 dependent transcriptional regulator	Regulator
ABUS13_RS17220	-	3605857..3607041 (-)	1185	WP_000939102.1	S41 family peptidase	-
ABUS13_RS17225	gpmI	3607057..3608604 (-)	1548	WP_000128742.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
ABUS13_RS17230	lptG	3608730..3609800 (-)	1071	WP_000881094.1	LPS export ABC transporter permease LptG	-

Sequence

Protein

• Length: 473 a.a.
• Molecular weight: 52995.18 Da
• Isoelectric Point: 6.9051

>NTDB_id=1053505 ABUS13_RS17215 WP_000840554.1 3604432..3605853(+) (pilR) [Acinetobacter baumannii strain Lv648]
MAEQQPLVLLVDDEEDLCLLMQMTLARMGIKTHLAYRVEQAKQLFTQFHYDACLTDLNLPDGSGIDLVKHVSQNYTNTPI
AVLTAYGNMDIAIAALKAGAFDFVSKPVNQVHLDQLLQKALNRQKVEHDATENALENKLLIGRSLPIQQLRIAIKKIARS
QAPVFVTGESGTGKEVVANLVHRLSNRSEGPFIAINCGAIPTELMESELFGHKKGSFTGATQDKQGLILSAHGGSLFLDE
IAELPLSMQVKLLRAVQEKKIRPVGSDQEIDVDFRVISASHQDLDLLVRQGKFRQDLFFRIHVMDLILPPLRERGEDVLL
LANHFIQKICMDWETPPKQLTEAAKTYLLQQHFPGNVRELRNMIERAITLSEDATIDVSHLHPAPLRANISNPFASAAQS
IQTTVAAPQVVKKLPSEGLERYLENIEKDILLNALNMTHWNRTLAAKKLGMTFRSLRYRLKKFGLDTETEQEV

Nucleotide

• Length: 1422 bp

>NTDB_id=1053505 ABUS13_RS17215 WP_000840554.1 3604432..3605853(+) (pilR) [Acinetobacter baumannii strain Lv648]
ATGGCAGAACAGCAACCACTGGTTTTGCTTGTAGACGATGAAGAAGATTTGTGCCTTTTAATGCAAATGACACTTGCACG
AATGGGGATTAAAACACATCTTGCTTATCGGGTTGAACAGGCCAAACAACTCTTCACTCAGTTTCATTACGATGCGTGTT
TAACCGACTTAAACCTACCCGATGGGAGCGGGATAGATTTAGTTAAACATGTCTCTCAAAATTATACTAATACTCCCATT
GCCGTTTTAACCGCCTACGGCAATATGGATATTGCAATTGCAGCATTAAAAGCAGGCGCTTTTGATTTTGTAAGCAAACC
GGTCAACCAAGTACATCTAGATCAGTTATTACAAAAAGCCTTGAATCGGCAAAAAGTAGAGCATGATGCTACCGAGAATG
CGTTAGAAAATAAATTATTAATCGGCCGTTCTCTACCCATCCAGCAGCTACGTATTGCAATTAAAAAAATTGCGCGCTCT
CAAGCACCGGTATTTGTTACCGGTGAGTCTGGAACAGGTAAAGAAGTAGTTGCTAACTTAGTTCATCGGCTGAGTAACCG
TAGTGAAGGCCCTTTTATTGCAATTAACTGCGGTGCCATTCCAACCGAACTGATGGAAAGTGAGTTGTTTGGGCATAAAA
AAGGGAGCTTTACCGGAGCAACTCAAGATAAACAAGGCCTCATTTTATCGGCACACGGTGGCAGTTTATTTTTAGATGAA
ATTGCCGAATTACCTTTAAGTATGCAGGTCAAACTGCTCCGTGCAGTACAGGAAAAAAAGATCCGGCCCGTCGGTTCAGA
TCAGGAAATCGATGTTGATTTCCGTGTGATTAGTGCAAGTCATCAAGACTTAGATTTATTGGTTAGACAAGGTAAATTCC
GTCAAGATTTATTCTTCCGTATTCATGTTATGGACCTCATATTGCCACCTCTACGTGAACGTGGCGAAGATGTCCTTTTA
CTAGCCAATCACTTTATTCAGAAAATTTGTATGGATTGGGAAACGCCACCTAAACAATTAACAGAAGCGGCCAAAACTTA
TCTGCTACAGCAACACTTTCCGGGTAATGTTCGCGAATTAAGAAATATGATTGAGCGCGCAATTACCTTAAGTGAAGATG
CTACGATAGATGTATCTCATTTACATCCTGCTCCTCTAAGAGCGAATATTTCTAATCCTTTTGCTTCGGCTGCTCAAAGC
ATACAAACCACTGTGGCAGCTCCTCAAGTCGTAAAAAAATTACCAAGTGAAGGCTTAGAACGTTATTTAGAAAATATTGA
AAAAGATATTTTACTCAATGCACTCAATATGACTCATTGGAATCGTACTTTAGCAGCTAAAAAATTAGGAATGACTTTCC
GCTCTTTACGCTATCGTCTGAAAAAATTTGGATTAGATACGGAGACAGAACAGGAAGTATAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (8-117)

• Sigma-54 interaction domain (Sigma54_activat) (140-306)

• Bacterial regulatory protein, Fis family (HTH_8) (423-463)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	98.52	100	0.985
pilR	Pseudomonas aeruginosa PAK	51.198	97.04	0.497