Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | ABUS27_RS09665 | Genome accession | NZ_CP169811 |
| Coordinates | 2040064..2040444 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain Lv371 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2035064..2045444
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABUS27_RS09635 | tadA | 2035183..2035686 (-) | 504 | WP_000033177.1 | tRNA adenosine(34) deaminase TadA | - |
| ABUS27_RS09640 | - | 2035693..2036817 (-) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| ABUS27_RS09645 | ung | 2036814..2037527 (-) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| ABUS27_RS09650 | - | 2037578..2038174 (-) | 597 | WP_000908454.1 | 6-carboxytetrahydropterin synthase | - |
| ABUS27_RS09655 | gspK | 2038404..2039363 (-) | 960 | WP_000301468.1 | type II secretion system minor pseudopilin GspK | - |
| ABUS27_RS09660 | xcpW | 2039363..2040064 (-) | 702 | WP_000594585.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| ABUS27_RS09665 | xcpV | 2040064..2040444 (-) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| ABUS27_RS09670 | - | 2040434..2040988 (-) | 555 | WP_000841373.1 | type II secretion system protein | - |
| ABUS27_RS09675 | - | 2040998..2041606 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| ABUS27_RS09680 | - | 2041644..2042417 (-) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| ABUS27_RS09685 | - | 2042435..2042776 (-) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| ABUS27_RS09690 | - | 2042788..2043768 (-) | 981 | WP_001075416.1 | DNA polymerase III subunit delta' | - |
| ABUS27_RS09695 | kdsB | 2043780..2044541 (-) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=1053342 ABUS27_RS09665 WP_000836911.1 2040064..2040444(-) (xcpV) [Acinetobacter baumannii strain Lv371]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=1053342 ABUS27_RS09665 WP_000836911.1 2040064..2040444(-) (xcpV) [Acinetobacter baumannii strain Lv371]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTGGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAGGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACAATTAGCCCAAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTTTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTGGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAGGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACAATTAGCCCAAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTTTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |