Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | ABUS32_RS10405 | Genome accession | NZ_CP169805 |
| Coordinates | 2149199..2149579 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836909.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain HvAb04 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2144199..2154579
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABUS32_RS10375 | tadA | 2144318..2144821 (-) | 504 | WP_000033177.1 | tRNA adenosine(34) deaminase TadA | - |
| ABUS32_RS10380 | - | 2144828..2145952 (-) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| ABUS32_RS10385 | ung | 2145949..2146662 (-) | 714 | WP_001177527.1 | uracil-DNA glycosylase | - |
| ABUS32_RS10390 | - | 2146713..2147309 (-) | 597 | WP_000908453.1 | 6-carboxytetrahydropterin synthase | - |
| ABUS32_RS10395 | gspK | 2147539..2148498 (-) | 960 | WP_001218621.1 | type II secretion system minor pseudopilin GspK | - |
| ABUS32_RS10400 | xcpW | 2148498..2149199 (-) | 702 | WP_000594588.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| ABUS32_RS10405 | xcpV | 2149199..2149579 (-) | 381 | WP_000836909.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| ABUS32_RS10410 | - | 2149569..2150123 (-) | 555 | WP_000841372.1 | type II secretion system protein | - |
| ABUS32_RS10415 | - | 2150133..2150741 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| ABUS32_RS10420 | - | 2150779..2151552 (-) | 774 | WP_000497301.1 | TatD family hydrolase | - |
| ABUS32_RS10425 | - | 2151570..2151911 (-) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| ABUS32_RS10430 | - | 2151923..2152903 (-) | 981 | WP_001075419.1 | DNA polymerase III subunit delta' | - |
| ABUS32_RS10435 | kdsB | 2152915..2153676 (-) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13991.24 Da Isoelectric Point: 9.8004
>NTDB_id=1053248 ABUS32_RS10405 WP_000836909.1 2149199..2149579(-) (xcpV) [Acinetobacter baumannii strain HvAb04]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDLDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDLDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=1053248 ABUS32_RS10405 WP_000836909.1 2149199..2149579(-) (xcpV) [Acinetobacter baumannii strain HvAb04]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGGACCAAAGCTCAGTTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCTGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGGACCAAAGCTCAGTTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCTGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
99.206 |
100 |
0.992 |