Detailed information NTG1052924

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: ABUS03_RS01185
• Genome accession: NZ_CP169782
• Coordinates: 246807..248228 (-)
• Length: 473 a.a.
• NCBI ID: WP_031959790.1
• Uniprot ID: A0A836YPC2
• Organism: Acinetobacter baumannii strain Hv640
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 241807..253228

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABUS03_RS01170	lptG	242860..243930 (+)	1071	WP_000881094.1	LPS export ABC transporter permease LptG	-
ABUS03_RS01175	gpmI	244056..245603 (+)	1548	WP_031959787.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
ABUS03_RS01180	-	245619..246803 (+)	1185	WP_000939111.1	S41 family peptidase	-
ABUS03_RS01185	pilR	246807..248228 (-)	1422	WP_031959790.1	sigma-54 dependent transcriptional regulator	Regulator
ABUS03_RS01190	pilS	248252..249820 (-)	1569	WP_001160328.1	PAS domain-containing sensor histidine kinase	Regulator
ABUS03_RS01195	-	249831..250466 (-)	636	WP_000633799.1	response regulator	-
ABUS03_RS01200	pbpG	250679..251725 (+)	1047	WP_001984577.1	D-alanyl-D-alanine endopeptidase PBP7/8	-
ABUS03_RS01205	thrC	251833..252972 (-)	1140	WP_000063593.1	threonine synthase	-

Sequence

Protein

• Length: 473 a.a.
• Molecular weight: 53028.17 Da
• Isoelectric Point: 6.6690

>NTDB_id=1052924 ABUS03_RS01185 WP_031959790.1 246807..248228(-) (pilR) [Acinetobacter baumannii strain Hv640]
MAEQQPLVLLVDDEEDLCLLMQMTLARMGIKTHLAYRVEQAKQLFTQFHYDACLTDLNLPDGSGIDLVKHVSQNYTNTPI
AVLTAYGNMDIAIAALKAGAFDFVSKPVNQVHLDQLLQKALNRQKVEHDAAENALENKLLIGRSLPIQQLRIAIKKIARS
QAPVFVTGESGTGKEVVANLVHRLSNRSEGPFIAINCGAIPTELMESELFGHKKGSFTGATQDKQGLILSAHGGSLFLDE
IAELPLSMQVKLLRAVQEKKIRPVGSDQEIDVDFRVISASHQDLDLLVRQGKFRQDLFFRIHVMDLILPPLRERGEDVLL
LANHFIQKICMEWETSPKQLTEAAETYLLQQHFPGNVRELRNMIERAITLSEDTTIDVSHLHPAPLRANISNPFASVAQS
IQTTVAAPQVVKKLPSEGLERYLENIEKDILLNALNMTHWNRTLAAKKLGMTFRSLRYRLKKFGLDTETEQEV

Nucleotide

• Length: 1422 bp

>NTDB_id=1052924 ABUS03_RS01185 WP_031959790.1 246807..248228(-) (pilR) [Acinetobacter baumannii strain Hv640]
ATGGCAGAACAGCAACCACTGGTTTTGCTTGTAGACGATGAAGAAGATTTGTGCCTTTTAATGCAAATGACACTTGCACG
AATGGGGATTAAAACACATCTTGCTTATCGGGTTGAACAGGCCAAACAACTCTTCACACAGTTTCATTACGATGCATGTT
TAACCGACTTAAACCTACCCGATGGGAGCGGGATAGATTTAGTCAAACATGTCTCTCAAAATTATACTAATACTCCCATT
GCCGTTTTAACTGCCTACGGCAATATGGATATTGCAATTGCAGCATTAAAAGCAGGCGCTTTTGATTTTGTAAGCAAACC
GGTCAACCAAGTACATCTAGATCAATTATTACAAAAAGCCTTGAATCGGCAAAAAGTAGAGCATGATGCTGCCGAGAATG
CGTTAGAAAATAAATTATTAATCGGCCGTTCTCTACCCATCCAGCAGCTACGTATTGCAATTAAAAAAATTGCGCGCTCA
CAAGCACCTGTATTTGTTACCGGTGAGTCTGGAACAGGTAAAGAAGTAGTTGCCAATCTGGTTCATCGGCTGAGTAACCG
TAGTGAAGGCCCTTTTATTGCGATTAATTGCGGTGCTATTCCAACCGAACTGATGGAAAGTGAGTTGTTTGGGCATAAAA
AAGGGAGCTTTACCGGAGCAACTCAAGATAAGCAAGGTCTCATTTTATCGGCACACGGTGGCAGTTTATTTTTAGATGAA
ATTGCCGAATTACCTTTAAGTATGCAGGTCAAACTGCTCCGTGCAGTACAGGAAAAAAAGATCCGACCCGTCGGTTCAGA
TCAGGAAATCGATGTTGATTTCCGTGTGATTAGTGCAAGTCATCAAGACTTAGATTTATTGGTTAGACAAGGTAAATTCC
GTCAAGATTTATTCTTCCGTATTCACGTTATGGACCTCATATTGCCACCTCTACGTGAACGTGGCGAAGATGTCCTTTTA
CTTGCCAATCACTTTATTCAGAAAATTTGTATGGAGTGGGAAACATCACCTAAACAATTAACAGAAGCAGCCGAAACTTA
TCTGCTACAGCAACACTTTCCGGGTAATGTTCGTGAATTAAGAAATATGATTGAGCGCGCAATTACCTTAAGTGAAGATA
CCACTATAGATGTATCTCATTTACATCCTGCTCCACTAAGAGCAAATATTTCTAATCCTTTTGCTTCGGTTGCTCAAAGC
ATACAAACCACTGTGGCAGCTCCTCAAGTCGTAAAAAAATTACCAAGTGAAGGCTTAGAACGTTATTTAGAAAATATTGA
AAAAGATATTTTACTCAATGCACTCAATATGACTCATTGGAATCGTACCTTAGCAGCTAAAAAATTAGGAATGACTTTCC
GCTCTTTACGCTATCGTCTGAAAAAATTTGGCTTAGATACGGAGACAGAACAGGAAGTATAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (8-117)

• Bacterial regulatory protein, Fis family (HTH_8) (423-463)

• Sigma-54 interaction domain (Sigma54_activat) (140-306)

3D structure

• AlphaFold DB: A0A836YPC2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	98.097	100	0.981
pilR	Pseudomonas aeruginosa PAK	50.763	97.04	0.493