Detailed information NTG1052883

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: ABUS02_RS01180
• Genome accession: NZ_CP169779
• Coordinates: 246774..248195 (-)
• Length: 473 a.a.
• NCBI ID: WP_031959790.1
• Uniprot ID: A0A836YPC2
• Organism: Acinetobacter baumannii strain Hv635
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 241774..253195

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABUS02_RS01165	lptG	242827..243897 (+)	1071	WP_000881094.1	LPS export ABC transporter permease LptG	-
ABUS02_RS01170	gpmI	244023..245570 (+)	1548	WP_031959787.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
ABUS02_RS01175	-	245586..246770 (+)	1185	WP_000939111.1	S41 family peptidase	-
ABUS02_RS01180	pilR	246774..248195 (-)	1422	WP_031959790.1	sigma-54 dependent transcriptional regulator	Regulator
ABUS02_RS01185	pilS	248219..249787 (-)	1569	WP_001160328.1	PAS domain-containing sensor histidine kinase	Regulator
ABUS02_RS01190	-	249798..250433 (-)	636	WP_000633799.1	response regulator	-
ABUS02_RS01195	pbpG	250646..251692 (+)	1047	WP_001984577.1	D-alanyl-D-alanine endopeptidase PBP7/8	-
ABUS02_RS01200	thrC	251800..252939 (-)	1140	WP_000063593.1	threonine synthase	-

Sequence

Protein

• Length: 473 a.a.
• Molecular weight: 53028.17 Da
• Isoelectric Point: 6.6690

>NTDB_id=1052883 ABUS02_RS01180 WP_031959790.1 246774..248195(-) (pilR) [Acinetobacter baumannii strain Hv635]
MAEQQPLVLLVDDEEDLCLLMQMTLARMGIKTHLAYRVEQAKQLFTQFHYDACLTDLNLPDGSGIDLVKHVSQNYTNTPI
AVLTAYGNMDIAIAALKAGAFDFVSKPVNQVHLDQLLQKALNRQKVEHDAAENALENKLLIGRSLPIQQLRIAIKKIARS
QAPVFVTGESGTGKEVVANLVHRLSNRSEGPFIAINCGAIPTELMESELFGHKKGSFTGATQDKQGLILSAHGGSLFLDE
IAELPLSMQVKLLRAVQEKKIRPVGSDQEIDVDFRVISASHQDLDLLVRQGKFRQDLFFRIHVMDLILPPLRERGEDVLL
LANHFIQKICMEWETSPKQLTEAAETYLLQQHFPGNVRELRNMIERAITLSEDTTIDVSHLHPAPLRANISNPFASVAQS
IQTTVAAPQVVKKLPSEGLERYLENIEKDILLNALNMTHWNRTLAAKKLGMTFRSLRYRLKKFGLDTETEQEV

Nucleotide

• Length: 1422 bp

>NTDB_id=1052883 ABUS02_RS01180 WP_031959790.1 246774..248195(-) (pilR) [Acinetobacter baumannii strain Hv635]
ATGGCAGAACAGCAACCACTGGTTTTGCTTGTAGACGATGAAGAAGATTTGTGCCTTTTAATGCAAATGACACTTGCACG
AATGGGGATTAAAACACATCTTGCTTATCGGGTTGAACAGGCCAAACAACTCTTCACACAGTTTCATTACGATGCATGTT
TAACCGACTTAAACCTACCCGATGGGAGCGGGATAGATTTAGTCAAACATGTCTCTCAAAATTATACTAATACTCCCATT
GCCGTTTTAACTGCCTACGGCAATATGGATATTGCAATTGCAGCATTAAAAGCAGGCGCTTTTGATTTTGTAAGCAAACC
GGTCAACCAAGTACATCTAGATCAATTATTACAAAAAGCCTTGAATCGGCAAAAAGTAGAGCATGATGCTGCCGAGAATG
CGTTAGAAAATAAATTATTAATCGGCCGTTCTCTACCCATCCAGCAGCTACGTATTGCAATTAAAAAAATTGCGCGCTCA
CAAGCACCTGTATTTGTTACCGGTGAGTCTGGAACAGGTAAAGAAGTAGTTGCCAATCTGGTTCATCGGCTGAGTAACCG
TAGTGAAGGCCCTTTTATTGCGATTAATTGCGGTGCTATTCCAACCGAACTGATGGAAAGTGAGTTGTTTGGGCATAAAA
AAGGGAGCTTTACCGGAGCAACTCAAGATAAGCAAGGTCTCATTTTATCGGCACACGGTGGCAGTTTATTTTTAGATGAA
ATTGCCGAATTACCTTTAAGTATGCAGGTCAAACTGCTCCGTGCAGTACAGGAAAAAAAGATCCGACCCGTCGGTTCAGA
TCAGGAAATCGATGTTGATTTCCGTGTGATTAGTGCAAGTCATCAAGACTTAGATTTATTGGTTAGACAAGGTAAATTCC
GTCAAGATTTATTCTTCCGTATTCACGTTATGGACCTCATATTGCCACCTCTACGTGAACGTGGCGAAGATGTCCTTTTA
CTTGCCAATCACTTTATTCAGAAAATTTGTATGGAGTGGGAAACATCACCTAAACAATTAACAGAAGCAGCCGAAACTTA
TCTGCTACAGCAACACTTTCCGGGTAATGTTCGTGAATTAAGAAATATGATTGAGCGCGCAATTACCTTAAGTGAAGATA
CCACTATAGATGTATCTCATTTACATCCTGCTCCACTAAGAGCAAATATTTCTAATCCTTTTGCTTCGGTTGCTCAAAGC
ATACAAACCACTGTGGCAGCTCCTCAAGTCGTAAAAAAATTACCAAGTGAAGGCTTAGAACGTTATTTAGAAAATATTGA
AAAAGATATTTTACTCAATGCACTCAATATGACTCATTGGAATCGTACCTTAGCAGCTAAAAAATTAGGAATGACTTTCC
GCTCTTTACGCTATCGTCTGAAAAAATTTGGCTTAGATACGGAGACAGAACAGGAAGTATAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (8-117)

• Bacterial regulatory protein, Fis family (HTH_8) (423-463)

• Sigma-54 interaction domain (Sigma54_activat) (140-306)

3D structure

• AlphaFold DB: A0A836YPC2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	98.097	100	0.981
pilR	Pseudomonas aeruginosa PAK	50.763	97.04	0.493