Detailed information NTG1052423

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: ACE2AO_RS21520
• Genome accession: NZ_CP169584
• Coordinates: 4327001..4327801 (+)
• Length: 266 a.a.
• NCBI ID: WP_004145898.1
• Uniprot ID: -
• Organism: Klebsiella pneumoniae strain 2024CK-3593430
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4322001..4332801

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACE2AO_RS21485 (ACE2AO_21485)	gspH	4322157..4322672 (+)	516	WP_004183045.1	type II secretion system minor pseudopilin GspH	-
ACE2AO_RS21490 (ACE2AO_21490)	gspI	4322669..4323034 (+)	366	WP_002889025.1	type II secretion system minor pseudopilin GspI	-
ACE2AO_RS21495 (ACE2AO_21495)	gspJ	4323031..4323627 (+)	597	WP_004178612.1	type II secretion system minor pseudopilin GspJ	-
ACE2AO_RS21500 (ACE2AO_21500)	gspK	4323624..4324610 (+)	987	WP_004213439.1	type II secretion system minor pseudopilin GspK	-
ACE2AO_RS21505 (ACE2AO_21505)	gspL	4324597..4325790 (+)	1194	WP_004191957.1	type II secretion system protein GspL	-
ACE2AO_RS21510 (ACE2AO_21510)	-	4325783..4326268 (+)	486	WP_023284693.1	type II secretion system protein M	-
ACE2AO_RS21515 (ACE2AO_21515)	-	4326258..4327004 (+)	747	WP_031588870.1	type II secretion system protein N	-
ACE2AO_RS21520 (ACE2AO_21520)	pilD	4327001..4327801 (+)	801	WP_004145898.1	A24 family peptidase	Machinery gene
ACE2AO_RS21525 (ACE2AO_21525)	hrpB	4327849..4330278 (-)	2430	WP_031588872.1	ATP-dependent helicase HrpB	-
ACE2AO_RS21530 (ACE2AO_21530)	thpR	4330351..4330887 (+)	537	WP_004177389.1	RNA 2',3'-cyclic phosphodiesterase	-
ACE2AO_RS21535 (ACE2AO_21535)	sfsA	4330887..4331603 (+)	717	WP_004177390.1	DNA/RNA nuclease SfsA	-
ACE2AO_RS21540 (ACE2AO_21540)	dksA	4331766..4332221 (+)	456	WP_002888845.1	RNA polymerase-binding protein DksA	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29389.01 Da
• Isoelectric Point: 8.8894

>NTDB_id=1052423 ACE2AO_RS21520 WP_004145898.1 4327001..4327801(+) (pilD) [Klebsiella pneumoniae strain 2024CK-3593430]
MTTLAALSLHFPFVWYGFLLLFGLALGSFYNVVIYRLPRMLTQTADDERITLSTPGSSCPQCRQPIAWRDNIPLLSFLWL
GRRARCCQAPIAWSYPLTELATGLLFILAGALLAPGLPLAGGLVLLSFLLILARIDARTQLLPDRLTLPLLWAGLLFNLN
EVYIALPDAVAGAMAGYLALWSVYWLFRLLTGKEALGYGDFKLLAALGAWCGWQVLPQVLLLASASGLVWTLLQRLWTRQ
SLQQPLAFGPWLALAGGGIFLWQQMV

Nucleotide

• Length: 801 bp

>NTDB_id=1052423 ACE2AO_RS21520 WP_004145898.1 4327001..4327801(+) (pilD) [Klebsiella pneumoniae strain 2024CK-3593430]
ATGACGACACTAGCCGCGTTATCGCTGCACTTTCCCTTTGTCTGGTATGGCTTTCTACTGCTGTTCGGCCTGGCGCTGGG
CAGCTTTTACAATGTGGTGATCTATCGTCTGCCGCGCATGTTGACCCAGACCGCGGACGACGAGCGGATAACCCTCAGCA
CCCCGGGCTCTTCCTGCCCGCAGTGCCGCCAGCCGATCGCCTGGCGGGACAATATCCCGCTGCTCAGTTTCCTCTGGCTG
GGCCGTCGCGCCCGCTGCTGTCAGGCGCCCATCGCGTGGAGCTATCCGCTGACCGAGCTGGCCACCGGACTGCTGTTTAT
CCTCGCCGGAGCTTTGCTGGCGCCGGGCCTGCCGCTGGCGGGCGGCCTGGTGCTGCTCTCGTTCCTGCTGATACTGGCGC
GGATTGACGCCCGGACCCAGCTGCTGCCCGATCGCCTGACTCTGCCCCTGCTGTGGGCCGGGCTGCTGTTCAATCTTAAC
GAGGTGTACATTGCCCTGCCGGATGCGGTCGCCGGGGCGATGGCCGGTTATCTGGCGCTGTGGTCGGTCTACTGGCTGTT
CCGCCTGCTGACCGGGAAAGAGGCGTTGGGCTATGGCGATTTTAAGCTGCTGGCGGCGCTGGGCGCCTGGTGCGGCTGGC
AGGTTCTGCCGCAGGTGCTGTTGCTCGCTTCGGCCAGCGGGCTGGTGTGGACCCTGCTGCAACGCCTGTGGACCCGGCAG
TCGCTGCAGCAGCCGCTGGCCTTCGGCCCCTGGCTGGCGCTGGCCGGCGGGGGTATTTTTCTCTGGCAGCAGATGGTCTA
G

Domains

Predicted by InterproScan.

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (21-109)

• Type IV leader peptidase family (Peptidase_A24) (123-231)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Vibrio cholerae strain A1552	49.434	99.624	0.492
pilD	Vibrio campbellii strain DS40M4	46.182	100	0.477
pilD	Acinetobacter nosocomialis M2	46.008	98.872	0.455
pilD	Acinetobacter baumannii D1279779	45.247	98.872	0.447
pilD	Neisseria gonorrhoeae MS11	43.295	98.12	0.425